G135067


Basic Information

Item Value
gene id G135067
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12959748 ~ 13247725 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU169568
GTCTGAGCTCAGTTCACTATGGAGAATAAAAGTGTCCTCACTGTACCTGATCCTGACACTGAGGTCTGCTGGAGCAGCAGGACAATCACACAGAGCCACTCTGATCGGTCAGACTTCATCcctgggacagacagactcgcAGGCCAATCCCAGCTGGAGAGCAGTGTCTCAGAGCCCAGGTGAGGAAGAACTGAGGAACAGCAAAGTGTAACATTAGAAACTGTGTGTACTGCACTGAATAACCACAATAAACAGCTATTATGATTGGGAGATACAGCCATTGCACTCGTGTCTCTGCACACATGCggcc
>TU169569
GTCTGAGCTCAGTTCACTATGGAGAATAAAAGTGTCCTCACTGTACCTGATCCTGACACTGAGGTCTGCTGGAGCAGCAGGACAATCACACAGAGCCACTCTGATCGGTCAGACTTCATCcctgggacagacagacagacagactcgcAGGCCAATCCCAGCTGGAGAGCAGTGTCTCAGAGCCCAGGTGAGGAAGAACTGAGGAACAGCAAAGTGTAACATTAGAAACTGTGTGTACTGCACTGAATAACCACAATAAACAGCTATTATGATTGGGAGATACAGCCATTGCACTCGTGTCTCTGCACACATGCggcc
>TU169570
GTCTGAGCTCAGTTCACTATGGAGAATAAAAGTGTCCTCACTGTACCTGATCCTGACACTGAGGTCTGCTGGAGCAGCAGGACAATCACACAGAGCCACTCTGATCGGTCAGACTTCATCCCTGGGACAgacagacagacagacagacagacagactcgcAGGCCAATCCCAGCTGGAGAGCAGTGTCTCAGAGCCCAGGTGAGGAAGAACTGAGGAACAGCAAAGTGTAACATTAGAAACTGTGTGTACTGCACTGAATAACCACAATAAACAGCTATTATGATTGGGAGATACAGCCATTGCACTCGTGTCTCTGCACACATGCggcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169568 False 310 lncRNA 0.50 2 12959748 13247725
TU169569 False 318 lncRNA 0.50 2 12959748 13247725
TU169570 True 330 lncRNA 0.50 3 12959748 13247725

Neighbor

gene id symbol gene type direction distance location
AMCG00012200 NA coding upstream 160297 12790527 ~ 12799451 (+)
AMCG00012199 NA coding upstream 171728 12787400 ~ 12788020 (+)
AMCG00012194 NA coding upstream 196072 12762624 ~ 12763676 (+)
AMCG00012193 NA coding upstream 201002 12758021 ~ 12758746 (+)
AMCG00012192 NA coding upstream 305432 12651153 ~ 12654316 (+)
AMCG00012223 NA coding downstream 55331 13303056 ~ 13307523 (+)
AMCG00012224 mylpf,LOC108249004,LOC108443170 coding downstream 70190 13317915 ~ 13323389 (+)
AMCG00012227 NA coding downstream 277959 13525684 ~ 13527970 (+)
AMCG00012236 NA coding downstream 293428 13541153 ~ 13543947 (+)
AMCG00012229 pelo,LOC107674509 coding downstream 302329 13550054 ~ 13556902 (+)
G135053 NA non-coding upstream 58155 12889770 ~ 12901593 (+)
G135055 NA non-coding upstream 61992 12897030 ~ 12897756 (+)
G135051 NA non-coding upstream 64167 12873218 ~ 12895581 (+)
G135045 NA non-coding upstream 119433 12836252 ~ 12840315 (+)
G135033 NA non-coding upstream 238584 12719862 ~ 12721164 (+)
G135110 NA non-coding downstream 14034 13261759 ~ 13262054 (+)
G135117 NA non-coding downstream 39941 13287666 ~ 13298200 (+)
G135131 NA non-coding downstream 124878 13372603 ~ 13397636 (+)
G135137 NA non-coding downstream 169680 13417405 ~ 13421051 (+)
G135138 NA non-coding downstream 179626 13427351 ~ 13427999 (+)
G135038 NA other upstream 173688 12784088 ~ 12786060 (+)
G135037 NA other upstream 182591 12770783 ~ 12777157 (+)
AMCG00012191 NA other upstream 235554 12702323 ~ 12724194 (+)
G135026 NA other upstream 243633 12566212 ~ 12716115 (+)
AMCG00012217 NA other downstream 21471 13269196 ~ 13276971 (+)
G135058 NA other downstream 174710 13422435 ~ 13425359 (+)
AMCG00012228 NA other downstream 223376 13471101 ~ 13508799 (+)
G135240 NA other downstream 271696 13519421 ~ 13520494 (+)
G135264 NA other downstream 336545 13584270 ~ 13585916 (+)

Expression


Co-expression Network