G135053


Basic Information

Item Value
gene id G135053
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12889770 ~ 12901593 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU169550
agcaatttgagctacagtagctcgtctgttgatcggaccacacgggccagccttcgctccccacgtgcatccagcagtaggtgagggtctgtgtcttgaactggatgcgtgccgctatcgggagccagtggagggagcggagcagtggagtagcgtgtgtgaatcagggcagagagaataccagacgagctgcagagttctggatgagctggagtgtcgggtagtagttgcaggcaggccggccaggagggagttgcagtagtccaggcaggagaggaccagggactcgatgagtagtcggtgaggaaagGACGGATTTGGtctatgttgctcaggaagaatctgcagTTACAAGAATGACAAGCCTTTGTTGGCACTTCCCCCTCACNN

Function

GO: NA

KEGG:

id description
ko04640 Hematopoietic cell lineage
ko05332 Graft-versus-host disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU169550 True 390 lncRNA 0.56 2 12889770 12901593

Neighbor

gene id symbol gene type direction distance location
AMCG00012200 NA coding upstream 90319 12790527 ~ 12799451 (+)
AMCG00012199 NA coding upstream 101750 12787400 ~ 12788020 (+)
AMCG00012194 NA coding upstream 126094 12762624 ~ 12763676 (+)
AMCG00012193 NA coding upstream 131024 12758021 ~ 12758746 (+)
AMCG00012192 NA coding upstream 235454 12651153 ~ 12654316 (+)
AMCG00012206 NA coding downstream 131515 13033108 ~ 13065375 (+)
AMCG00012207 NA coding downstream 167611 13069204 ~ 13074014 (+)
AMCG00012209 NA coding downstream 178596 13080189 ~ 13080518 (+)
AMCG00012210 NA coding downstream 218420 13120013 ~ 13122006 (+)
AMCG00012211 NA coding downstream 225575 13127168 ~ 13131962 (+)
G135045 NA non-coding upstream 49455 12836252 ~ 12840315 (+)
G135033 NA non-coding upstream 168606 12719862 ~ 12721164 (+)
G135027 NA non-coding upstream 189894 12636699 ~ 12699876 (+)
G135028 NA non-coding upstream 195955 12692668 ~ 12693815 (+)
G135030 NA non-coding upstream 241157 12612165 ~ 12648613 (+)
G135067 NA non-coding downstream 58155 12959748 ~ 13247725 (+)
G135072 NA non-coding downstream 82852 12984445 ~ 12985094 (+)
G135073 NA non-coding downstream 83914 12985507 ~ 12986142 (+)
G135097 NA non-coding downstream 311081 13212674 ~ 13216360 (+)
G135110 NA non-coding downstream 360166 13261759 ~ 13262054 (+)
G135038 NA other upstream 103710 12784088 ~ 12786060 (+)
G135037 NA other upstream 112613 12770783 ~ 12777157 (+)
AMCG00012191 NA other upstream 165576 12702323 ~ 12724194 (+)
G135026 NA other upstream 173655 12566212 ~ 12716115 (+)
G135070 NA other downstream 66784 12968377 ~ 12974053 (+)
AMCG00012217 NA other downstream 367603 13269196 ~ 13276971 (+)
G135058 NA other downstream 520842 13422435 ~ 13425359 (+)
AMCG00012228 NA other downstream 569508 13471101 ~ 13508799 (+)
G135240 NA other downstream 617828 13519421 ~ 13520494 (+)

Expression


Co-expression Network