AMCG00012200


Basic Information

Item Value
gene id AMCG00012200
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 12790527 ~ 12799451 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012200
GGTGCGCTATTATACTGTGTCCAGCCCCGCCGCTCCACATTTTCTGTGCTTTCTCTCACAGAGGTGCTGCACATAGATAGTCACATACAATTGCAAAACACGAAACCGGGAAATGGAGCTCAAATTTACTATTTTTGCTACGCTTGTAGCCTGTTTTGCTTATCTACAGACCGGCGACGCGATTGAAGCAATGCCCAAGGTGCAGGTGTACAGCCGCAACCCAGGCGAGTTCGACAAGGATAACACCCTGATCTGCCACGTCAGCGGCTTCCACCCCCCTGACATCAAGATCGACCTGCTGAAGGATGGACACCCCATCACTGACTTCAAGCAGTCCGACCTGGCATTCGAGCAGGGCTGGCGCTTCCACCTGACCAAGACTGCGCCCTTCACTCCCAAGAAGGGTGATGAGTACTCCTGCAGAGTGACACACAGCACCATCCCCGAGGGCAAGACCTACAATTGGGAGAAATCCAAAGCTGAATTAAACATGAAGATCGTCCTGTGTGTTGCTCTGCTGTGCGTCGTCGTGCACAACTCGGCGGCAGTACAGGAACGCCCCAAGGTGCAGGTGTACAGCCGCAACCCAGGCGAGTTCGACAAGGATAACACCCTGATCTGCCACGTCAGCGGCTTCCACCCCCCTGACATCAAGATCGACCTGCTGAAGGACGGACACCCCATCACTGACTTCAAGCAGTCCGACCTGGCCTTCGAGCAGGGCTGGCGCTTCCACCTGACCAAGACTGCGCCCTTCACTCCCAAGAAGGGTGATGAGTACTCCTGCAGAGTGACACACAGCACCATCCCCGAGGGCCAGACCTTCAGCTGGGAGCCTGATATGTAA

Function

GO:

id name namespace
GO:0002376 immune system process biological_process

KEGG:

id description
K08055 B2M; beta-2-microglobulin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012200 True 847 mRNA 0.55 5 12790527 12799451

Neighbor

gene id symbol gene type direction distance location
AMCG00012199 NA coding upstream 2507 12787400 ~ 12788020 (+)
AMCG00012194 NA coding upstream 26851 12762624 ~ 12763676 (+)
AMCG00012193 NA coding upstream 31781 12758021 ~ 12758746 (+)
AMCG00012192 NA coding upstream 136211 12651153 ~ 12654316 (+)
AMCG00012198 NA coding upstream 167446 12621011 ~ 12623081 (+)
AMCG00012206 NA coding downstream 233657 13033108 ~ 13065375 (+)
AMCG00012207 NA coding downstream 269753 13069204 ~ 13074014 (+)
AMCG00012209 NA coding downstream 280738 13080189 ~ 13080518 (+)
AMCG00012210 NA coding downstream 320562 13120013 ~ 13122006 (+)
AMCG00012211 NA coding downstream 327717 13127168 ~ 13131962 (+)
G135033 NA non-coding upstream 69363 12719862 ~ 12721164 (+)
G135027 NA non-coding upstream 90651 12636699 ~ 12699876 (+)
G135028 NA non-coding upstream 96712 12692668 ~ 12693815 (+)
G135030 NA non-coding upstream 141914 12612165 ~ 12648613 (+)
G135007 NA non-coding upstream 427684 12362545 ~ 12362843 (+)
G135045 NA non-coding downstream 36801 12836252 ~ 12840315 (+)
G135051 NA non-coding downstream 73767 12873218 ~ 12895581 (+)
G135053 NA non-coding downstream 90319 12889770 ~ 12901593 (+)
G135055 NA non-coding downstream 97579 12897030 ~ 12897756 (+)
G135067 NA non-coding downstream 160297 12959748 ~ 13247725 (+)
G135038 NA other upstream 4467 12784088 ~ 12786060 (+)
G135037 NA other upstream 13370 12770783 ~ 12777157 (+)
AMCG00012191 NA other upstream 66333 12702323 ~ 12724194 (+)
G135026 NA other upstream 74412 12566212 ~ 12716115 (+)
G135070 NA other downstream 168926 12968377 ~ 12974053 (+)
AMCG00012217 NA other downstream 469745 13269196 ~ 13276971 (+)
G135058 NA other downstream 622984 13422435 ~ 13425359 (+)
AMCG00012228 NA other downstream 671650 13471101 ~ 13508799 (+)
G135240 NA other downstream 719970 13519421 ~ 13520494 (+)

Expression


Co-expression Network