AMCG00012206


Basic Information

Item Value
gene id AMCG00012206
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 13033108 ~ 13065375 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012206
AGGACCGCAGGGAGGCTGGGTTTCATAACAGCGCTTTTCAGGGGCCGGAGGTCCAGTCGAATTTCAATTTCGAGTTTCAGAGGAACAGAAGAGGAGGtgatggaaaaagaaaaagagaaagggaaagggaCAGAGACACCGGGAGAtgCTAAGCCAACTCAAATGCAACCTCCACGAAGGAAAAAAGCAGGACCTGTCACACAGATCCAAGATGCCCCCCAAGGAGGGAGGGAAACAGATTCAGAGATTGGGGGaagatataaaaacatcaatGATCATACTCAATACCTGATTGAACTGGGAACTCAGCATTTTCATGACAAGTTAATTGACAAGAAGGATGGCAATTCTCACATGAGGACAGTGGACCCTGTGAGTACATGGCAGTCGACAAACCTGATTGGCAACAGGTGTACGGACACTGAACCAGCAACTGAGACTACTGAGGACTCAAGAGACCTTCCCTTGAATAAAGCACCCAGTGATCTGGAAGAGAAAAGTAAATCTGGAAGTCCCAAAACCATCAAGGATTTAATTATGGATGCCCTGGACAAACTATCCACAGAAAATCTAAAAAGATTTAAGAACAAGTTGCGAGatattcatatttacaattttaaaccaGCTTATGTTAATGATGAAATGGATAGAGATGACCTTTCAAGACTTATCATCAGGAGGTGCAAGAAGAGTAATGCAGTAAATTTTACTGTTGAAGCTCTCAAAGCAATTAAGTGCAATGAGGAAGCTAAGATTCTGAACAATGAACAAATATATGTGAAGGTGGATAACAAGCCTGAGGACCAGCAACCTAAACCTGTCGAGAGGCACATCGCTGACTCTCTGGAAAGTCTGactaaacaagaaataaaaaagtttaaatacaatCTGAGTGACGAAAAGGCTTTCCCTAATTATCAAGATGAAGACATAACAGTTCAGGACCTTGCACAGGATATCACTGAATACTACAGCGATAAAGCAGGAGAGAACGTAATCAAACTTTTAGAAAAGATGGGGCTGCAGGAGGATGCTGCTGAgcttaaaacaattataattaaggCCATCTCTCCTCCTAAGGTATTCAAGACAGCTGATGTAAAACCCTGCAGTGTCATTCTGCAATGGGACCAACctgatgaaaaaaatacaaaatttaagATAAGCTATGATATtgatggagaaaaacaaacagaatcaaTTGACTGGGGAACCACTAAAGAAATTCAGGGTTTGAAACCAGAAACAGATTATAAATTCACAATCTGTACGGTTCGTGGAACTGATGAGAGCTATCCTGTGTCATTAACGGTCACAACAGcttctgGCACAGAAGAAAATCACAAGGAGGAAAACACAATTGAGATTTATATCAGAGAAACCCTGAACAAACTGAGAACAGAAAaactgaagtgttttatatcattcttaaataaaaaaatggaaattgaggCAACAAATATTGTCTCCCTGGTATCTGATATGATTAAAgaacatggggaaaaaaatattctagaagaCACAATTAAGAGTTTAAATGAAATCTACTATAAGAAATCTTCAAAGGAATTGAAGGAGAAGACCAAAAACTCCATCTATGCTCCTTACAGATTCAAAGCAACTGATGTCAAACCTAAGAGTGTCATTCTACAATGGCACTGGGAAAAACTTGATGAAAAGGATAATGAAAATACCAAATTTGAGATATGCTATGAAATTGATGgagataaaaaaacagaatcaattGAATGGAGAACCAAGTTTAAGACAATTAATGGTCTGAAGGACCaaactttttatgtatttacaatcTGCACAGTTCGAGGAACTGATATGAGCAGCTCTGTGAAGTTACATGTCAAAACAAAGGAGGATCTAGTCAAGAAGAAAATGGAGGAACTCAATCTGAAAAGAGAACAACTggacaaagaagaaaaagaaattcAAAGCACACTTCAATATGTACAGCATTTAAAGGATCGATTAGAAAAAGATATAATGGAGGCGTATGAAGCAGGGCTGAAGAAAATagagaaagaaatgaaacagaaatatgaagGGAAGctgatggaaagagagagagaaattgaacagaaatatgaaaatgagctgatggaaagggagaaaaaattGAAACAGAGATATGAAGAAGAGcagatggaaagagagaaaaaaatgaaacatagATATGAAGAGGagtggagaaagagagaagagaatATAAATGCTTACAAAGAACAACTGAAGCAAGAGGAAGTCCTCCAcagcaCAATAGAGGATGTTGAAAGGCTGGAAGAAGTACTACAATTTCAGGAGCTTGGGGAAGGGCAGAAGGAAATTGCTactttcattaaaaagtcatttCAGAATCTTTATCGGTTTCCTGATCTCACGGAACAGCTGAGAGACAGAGCGGTTTCATTCCAGCTGCAGCTTGCTCATGAAATCAATGTGATTCAGAAGaTGAGAGGAACAGTCAGTACAGTCTTAGAGGACTTAATTCCAGATACCAGGGAAACTCTGAAACTCTGCAATGGTAAAATGGCCCGAGAAATTATTTCACTGCTCCTACAGTGGGTATCTGATTTGAAGAAGGATGCTACTGAAACAAGAGAGAGGTTCCAACAAATCAGGGTCAACACCATCATCTGCAGCGTGGAGAAAAAGAAGCTCAAGGTTATCACAGAACGGGCTCCACTCAATGTAGAAACTGAAGTTAcggaagaagaaataaatgatatttataaaaaaaaggaatctTGTGAAGAAGACATAGCGAGGAGTCTAAATAACCTTAAAACTGTCATACGCCATGTAGGATCTATAGAAGGATTTTCAGAAGGCTTTCTATTAAGGTCTGGTTTTCCATTTATGGTACAAAGGGACAGATTGTGCCATTCCCTGGGGATGAGCTCAGattctgatgatgatgaattaCAAGCTGAAATATACAATCATATCGCAGACAAATGTGAAGAAGTTATTAAACAAAAGATCCAAAGAAGAatgctggaggaggagctgaaTGCAAAAAGGGAAACTCTGGAGCATTTAAGAAACAGAAAAATGAATAATGATGAGATCATTCTCAAGACTGTAAAACAGGATCTGTTGCATGTTGAAGAGAAGTGGAGAAGTTGCATTGAGTTTTGGACAAAGATAGAAACTTTTCTTGCAAGCAAGATGGAGAGGAGCATCGCCTACCTGAAAAACATTGAACACAAGACATATCAGAGAATCAATTTTGCGAAACTGGTGGAATCCAATTTGTTTTGGAGAAAGTTTGGAATCCTGTGTGGAAAATATTTGGATCTGGTTCAAAAAGCTGAAGTGAAAAACTACTATGCATTTCTGAATGGGGAATGTGAAGATGCCActgaggaggaagaggcagTTGAAGAGAGTGATTTATTCAATGAGTCATCTTcagatgaagaggaagaggcagaggcagagaaaGAGTGTATAAAGGCCTAGAGcaatgtcttgtttttgtgcTCTTCAGATGAGGATTTATTCTGCTGATTTTCTCAGTTTGGCAAAAATACATTGCAACAAAATTACTTGCAAACATAAGACAAGAAAGGGGATATTAGATtgcttaaatacatattttccttccAGGTTTGGAGATGCCTACATATTAATTCCAGTATGTCAGGGAACAGAGGCTTTATGTTTCTACTAAACAGAAAGCCACCccttatgaataataaatacatctaagTGGACTAGGAGTAaactatacatacattttaggTATATTGCAGAACagactacagtgagggaaatgtttgcatattcgcaaatggaagaaacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012206 True 3822 mRNA 0.38 15 13033108 13065375

Neighbor

gene id symbol gene type direction distance location
AMCG00012200 NA coding upstream 233657 12790527 ~ 12799451 (+)
AMCG00012199 NA coding upstream 245088 12787400 ~ 12788020 (+)
AMCG00012194 NA coding upstream 269432 12762624 ~ 12763676 (+)
AMCG00012193 NA coding upstream 274362 12758021 ~ 12758746 (+)
AMCG00012192 NA coding upstream 378792 12651153 ~ 12654316 (+)
AMCG00012207 NA coding downstream 3829 13069204 ~ 13074014 (+)
AMCG00012209 NA coding downstream 14814 13080189 ~ 13080518 (+)
AMCG00012210 NA coding downstream 54638 13120013 ~ 13122006 (+)
AMCG00012211 NA coding downstream 61793 13127168 ~ 13131962 (+)
AMCG00012213 NA coding downstream 79052 13144427 ~ 13148574 (+)
G135073 NA non-coding upstream 46966 12985507 ~ 12986142 (+)
G135072 NA non-coding upstream 48014 12984445 ~ 12985094 (+)
G135053 NA non-coding upstream 131515 12889770 ~ 12901593 (+)
G135055 NA non-coding upstream 135352 12897030 ~ 12897756 (+)
G135051 NA non-coding upstream 137527 12873218 ~ 12895581 (+)
G135097 NA non-coding downstream 147299 13212674 ~ 13216360 (+)
G135110 NA non-coding downstream 196384 13261759 ~ 13262054 (+)
G135117 NA non-coding downstream 222291 13287666 ~ 13298200 (+)
G135131 NA non-coding downstream 307228 13372603 ~ 13397636 (+)
G135137 NA non-coding downstream 352030 13417405 ~ 13421051 (+)
G135070 NA other upstream 59055 12968377 ~ 12974053 (+)
G135038 NA other upstream 247048 12784088 ~ 12786060 (+)
G135037 NA other upstream 255951 12770783 ~ 12777157 (+)
AMCG00012191 NA other upstream 308914 12702323 ~ 12724194 (+)
G135026 NA other upstream 316993 12566212 ~ 12716115 (+)
AMCG00012217 NA other downstream 203821 13269196 ~ 13276971 (+)
G135058 NA other downstream 357060 13422435 ~ 13425359 (+)
AMCG00012228 NA other downstream 405726 13471101 ~ 13508799 (+)
G135240 NA other downstream 454046 13519421 ~ 13520494 (+)
G135264 NA other downstream 518895 13584270 ~ 13585916 (+)

Expression


Co-expression Network