AMCG00012742


Basic Information

Item Value
gene id AMCG00012742
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 6289631 ~ 6327075 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012742
ATGAAGTTCAAGCCTAACCAGACTAGGACTTATGACGGGGAAGGCTTCAAGAAGAGGGCGGCGTGTCTGTGCTTCAAGAACGAACGGGAGGACGAGGCTGGTGTGAAAGGCAAGCTAGGAAGACTGCTTGGAGTATTTGAGAATCAAGACCGGAAGCATAGGACCTACGTATATGTTCTCACAGTGACCGAGACGCTAGAAGACTGGGAGGACTCGGTCAATATTGGCCGAAAGCGCGAGTGGTTTAAAATTGAAGAGGCCATAAAAGTCCTACAGTGTCACAAACCTGTACACGCCGAATACCTGGAAAAACTTAAACTGGGATGCTCACCCACCAATGGCAACTCAATGGTCCCCTCCCTTCCAGACGACAACTCGCCCCTGTATGTGACCTCACAGAACCCGGGACTGCCGTCGTCGCGGAGATAG

Function

GO: NA

KEGG:

id description
K07766 E3.6.1.52; diphosphoinositol-polyphosphate diphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012742 True 429 mRNA 0.52 4 6289631 6327075

Neighbor

gene id symbol gene type direction distance location
AMCG00012736 NA coding downstream 31707 6256830 ~ 6257924 (-)
AMCG00012735 NA coding downstream 50212 6234676 ~ 6239419 (-)
AMCG00012731 cry1aa,LOC108426403,LOC108279922,LOC105900698,LOC103023024,LOC107757210 coding downstream 202805 6071923 ~ 6086826 (-)
AMCG00012730 NA coding downstream 292519 5990103 ~ 5997112 (-)
AMCG00012715 NA coding downstream 458117 5830618 ~ 5831514 (-)
AMCG00012743 NA coding upstream 35374 6362449 ~ 6378254 (-)
AMCG00012744 NA coding upstream 85656 6412731 ~ 6435631 (-)
AMCG00012745 NA coding upstream 124934 6452009 ~ 6460026 (-)
AMCG00012752 NA coding upstream 280119 6607194 ~ 6619758 (-)
AMCG00012757 strap,LOC106576022,LOC106609126,LOC105020178 coding upstream 488733 6815808 ~ 6823765 (-)
G39462 NA non-coding downstream 1696 6285455 ~ 6287935 (-)
G39443 NA non-coding downstream 20693 6268235 ~ 6268938 (-)
G39377 NA non-coding downstream 394517 5816472 ~ 5895114 (-)
G39371 NA non-coding downstream 477595 5778290 ~ 5812036 (-)
G39295 NA non-coding downstream 743562 5545834 ~ 5546069 (-)
G39546 kras,LOC103038241,LOC105900436,LOC107675271,LOC107675456 non-coding upstream 445893 6772968 ~ 6847396 (-)
G39556 NA non-coding upstream 459381 6786456 ~ 6795733 (-)
G39561 NA non-coding upstream 570912 6897987 ~ 6898237 (-)
G39580 NA non-coding upstream 823542 7150617 ~ 7150823 (-)
G39662 NA non-coding upstream 1344161 7671236 ~ 7671642 (-)
AMCG00012732 NA other downstream 225814 6052364 ~ 6063817 (-)
G38490 NA other downstream 4105468 2183885 ~ 2184163 (-)
AMCG00012646 LOC107658747,LOC107707963 other downstream 4472431 1578955 ~ 1817200 (-)
G38458 NA other downstream 4512410 1776854 ~ 1777221 (-)
AMCG00012628 golt1b,LOC108428784,LOC107676462,LOC107701063 other downstream 5750040 514222 ~ 539591 (-)
G39487 NA other upstream 128646 6455721 ~ 6456178 (-)
AMCG00012751 NA other upstream 311405 6638480 ~ 6695924 (-)
AMCG00012782 NA other upstream 1564414 7891489 ~ 7904455 (-)
AMCG00012829 NA other upstream 2785366 9112441 ~ 9152405 (-)
AMCG00012858 NA other upstream 4413279 10740354 ~ 10753698 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000013_06603570_06626148 NUDT4, NUDT4A coding CI01000013 null 6602062 ~ 6626148 (-)