AMCG00013544


Basic Information

Item Value
gene id AMCG00013544
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 35256529 ~ 35261313 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013544
TTAAAACCACATGTGTGCACGGCTGAGACAGTCAACCGCGGAGAGGAAACTTGACAAATACAATCagagggggggggaagagaaaaagttttgttttggtgaaaGGGCACCTTCAGCGGGCTGGTTAAAATGCCTTCTTACTTTTTCACCCCATTCATTGATCTTGACGAAGTTTTGTGCAAGAAGTTTCTCAGTCTGGACCTTCGAGATCCTCCCAAGAGTTCAGCACCGGCCGCGAAACCGGTGGGCTTCAGGCGCTCCCAGACCGCCTGCTCTTTGACTCTCCCAGCCACGGCCGCCAACCCTGCAGACGACTCGCAGGCTCTGACCCTGCCGTCCAACCAGTGGGGCCAGCAGATGGAGCAGCCTCCTGCATCCGGCTGGAGCAAGATGTCTTTCTGGGGGGAGCGCTCGGTCAGCATGGTGGAGCCTAGCGCCGGCAGTCTCGGGTGGGCATCTTCTGATGGCAGCCAAGGCAAGCGTCAGCTGTCCACCTCTCCTTCCAGCCCGGGGGCcaactcctcttcctcttcctcctcctcgtcctcgtcctcttcctcctcccgcTACAAGACGGAGCTGTGCCGCACTTTCGAGGAGAGCGGCACCTGCAAGTACGGCACCAAGTGTCAGTTCGCCCACGGCGCGGATGAACTGCGCGATCTCAACCGACACCCGAAATACAAGACGGAGCCCTGCCGCACCTTCCACACCATTGGCTTCTGTCCCTATGGCACCCGCTGCCACTTCGTGCACAACACTGAGGAGGAGCAGCGCCAGGCTCGGGCCCAGTCCTCCCGCAGCCGCCGGCCTCCCCTCCTGAGACAGAGTGTCAGCTTCTCTGGCTTCCCCTCTGCCCCCGTCCCCCAGGAGCcgctcttctccctctcccggGTGCCCTCCACCTCCCCTCCAGCGTCGGTGGGCATCCCCGAACTCCTCTCCCCTACCTTCCTAGACCACAACGCTTTCCCCATCTTCTCTGACTCGGGCCCGGAGCCTGGGCCTCAGTTCCTGCCCTCCACTGACTCCGGCTGCTCCTTCTGCGGGCAGGGCTGCGCGAAGGCCTCCCTGTCGGCCAAGGCTGAAGAGTGCCAGCACCAGTCCGGCTTCCCCAGCATGGTCCTGGGGTCGAGGAGCCTGtcctccacctccctctctgACCACGAAGGAGGCTCCGGCAGCTCAGCCAGCAGTCTCAGCGGCTCCGAGTCCTCGGGCTTTGAGGGGCTCAACAGGAGGCTGCCGATATTCAGCCAGCTGTCCGTCCCAGATGAGGGTTTCACCAAAGAGGGCAGCGCTGCCTTTTTCAGTTAACTGTTGCCATTCCTTTACTAACACTTGTTGAATGAGATTCCTGAAGCCCAGAGAgtgaaagtcttttttttttctttttaattctgttttcattgttttaaacattggATTGTATACTGTTGTATACCTACCATTTTGTATTCTGTGGTGCGTCATGCCTCAGTAACTGCTCTAGTTTTAATGCTCAGCTGGGAGTAGGATAGAGCTATAATATGAGGAAGTGAAGGGGGTGAAACCTTTCACTGTGCTATTTGCATATGAAACTCTGTACAGGTGACTTGCTCTAGAATTAGGTGGATTGAAAAgctatttctattttttattattaccttCAAATTAACAATTTTATAAAGATTTTGTGATTTGGGATGATGcttttccaaaaagaaaaaaaaaaagaaggtgGGTGTGGGAGACAAGGAATCTGTTTCCTAGGAATCCATTAGTTCCTTGTAAAGCCTGTGCAGGTTGCAAATTTGAGGCCTTGAAGTAGCAATCCTCTATGAAGGGTTTcagtataaaaagaaaaaaaatgccaaaGAGGAATACgatttcttaaattaatttaaggGCATCTTGCTGCCTTTTTTTGTGACTTTCAGAGGAGCACCCCTGTCTGTTCTCTAGGAGTGTTCCCTGCGTTCTGTTTCTTTTAGGGCGGACAAAAGTTCTTTTTGTGAATTTTTCAAAACCCTAAACTTGTACGTTTTGTCTGCTGAGGTGCCGTTTGCCTTGGAAGTCGTTCAATAATGTTGAGACTGTTTCTTGGAATTACCATGTGAGCACGAGGCATAATTACAGTTTTCTGATGTCGTGGAGTAATGTTGCCAAAGTTGTATAAAACAAGTTTTCTCATTGCAAAAGGAGATCTGTCTGTGAATTTTCCCAACTTGTTTCGAGATGGCTCTTAATTGCTATAGCCAAGCCTTAAACAATTACAGGTTTGTAGGGTCTGCAGcagatgggtttttttttttcttttggaaaaggGGTTTGGTTCATTCACAGATGTAGCagttgttgtttaatttaattttggtgATTCAGCAAATTCAGATGAGTAGTATGGATTTCAAATATCAAGAAAGTCAAACTGTGATTGTGTGGTAGGATGAAATTTTGTATTCGACTTTCTTTTAATCACTGATAAGCAGAAACTATGTGCCTGCTTTGTTTTCATGGTGCTATGTTAAAAGATGGGCCTGTTATTTATATGGTTagaattataatgtattgtagCTCAAATGCTCTAACCACTAAGCTACCAAAAATAGTCCTTTTTATAACTATAAATGGCacctatattgttttttttccctccttgtAGAATGTGATTGATAAAATTCTTTTTCAAGCTATgtagtgttaaaaaaagaaatgaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013544 True 2699 mRNA 0.48 2 35256529 35261313

Neighbor

gene id symbol gene type direction distance location
AMCG00013541 paf1 coding downstream 120035 35129171 ~ 35136494 (-)
AMCG00013542 samd4b coding downstream 150695 35081511 ~ 35105834 (-)
AMCG00013537 LOC108246317 coding downstream 188598 35066249 ~ 35067931 (-)
AMCG00013536 NA coding downstream 199094 35055617 ~ 35057435 (-)
AMCG00013538 NA coding downstream 264414 34991882 ~ 34992115 (-)
AMCG00013547 trappc6a,LOC106580727 coding upstream 25033 35286346 ~ 35306459 (-)
AMCG00013548 NA coding upstream 53351 35314664 ~ 35318941 (-)
AMCG00013550 NA coding upstream 563692 35825005 ~ 35826534 (-)
AMCG00013551 NA coding upstream 625983 35887296 ~ 35887799 (-)
AMCG00013557 NA coding upstream 697484 35958797 ~ 35959490 (-)
G45145 NA non-coding downstream 41964 35214251 ~ 35214565 (-)
G45136 NA non-coding downstream 130952 35123355 ~ 35125577 (-)
G45123 NA non-coding downstream 138605 35105887 ~ 35117924 (-)
G45121 NA non-coding downstream 174190 35070738 ~ 35082339 (-)
G45102 NA non-coding downstream 283823 34972482 ~ 34972706 (-)
G45187 NA non-coding upstream 18244 35279557 ~ 35279821 (-)
G45201 NA non-coding upstream 88652 35349965 ~ 35350164 (-)
G45210 LOC107575789 non-coding upstream 393972 35655285 ~ 35659856 (-)
G45248 NA non-coding upstream 573838 35835151 ~ 35932634 (-)
G45251 NA non-coding upstream 584237 35845550 ~ 35902337 (-)
AMCG00013531 NA other downstream 1556817 33692844 ~ 33699712 (-)
G45037 NA other downstream 1577622 33678224 ~ 33678907 (-)
AMCG00013518 NA other downstream 1754782 33468849 ~ 33501747 (-)
AMCG00013488 NA other downstream 2628625 32622153 ~ 32627904 (-)
G44719 NA other downstream 2688577 32565760 ~ 32567952 (-)
AMCG00013578 NA other upstream 1617880 36879193 ~ 36885493 (-)
G45468 NA other upstream 1697864 36959177 ~ 36959914 (-)
G45571 NA other upstream 1869545 37130858 ~ 37223824 (-)
G45614 supt5h other upstream 2221603 37482916 ~ 37483608 (-)
G45617 LOC100846954 other upstream 2227416 37488729 ~ 37538310 (-)

Expression


Co-expression Network