G46491


Basic Information

Item Value
gene id G46491
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 41171725 ~ 41174790 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU57963
CACATGTTCActgtgttttcagaagaaaaatggCTCCAGAGGCACCATGCGTTTTTTATTGGTAGATTATACATAAtacaatgattatataatacaaCCCCTCACATCACAGACAACAGAATATACAAGAATGCAATGCACAATCGGGAAGGCCATAATgcaccaaataaaaaaacaaacaagaaaaacaaaaaaaaaacaaaataaaacaccctCTCCCACCCACCCTCCCAagcttaaaatacattaaacataccTCATCATTATCAACATCACACACCATTTCCAAAAGGTAACACATTGAGCTCCCTTTGAAAgtctcttttatatatataaaaaaaaaaaaaaaaaaaagtctttaaaaaacaaaattcaaataataataaaaaacccATCAAAGAAAGGCACTGCATCCGTGGGCCTGTAGTGAAGTCTGATGAACGGTGTTTCACAGATACTGTCTATTGTGTTCCCAGGCCCGCTTGGTTGACAGTAGTGTAGTCCTTACTCCAGCAACAAATCTCATGTCCAACTGCTCGTCCTTTCTTCCAGCATTTTTCATCACAACACATTCGGGATATCTCACATTTCTCCTTCCACATACCGCTTCTTCCCCAAAAGGCAACTGCATTGCAAACACCCCACCCACCTCCCAGCAATACTCCCTCTCCCAGCCCTCACCCCTccgtcccccaccccccatgccCATATAAATAACAGTTAAGTCTGACTACAGCACAGAGACCAGAGCTCGCCACTAATTGTAACAGGCTGTTTGGAGTTGTCGTTTTTATTATTGctacataacaacaacaatacacaaAGAGCTGGGGGTGGCACGGAGTTGTTATGTGACTTCTGGGCACCTTAACTTATCTGGTCAAGGTTGAGGAGGATATCAGATGCAATATAACTAGCTGAAATGTGCAGGCAAATTTGTTTTTTGGACTTTAAACTCATTCTCATTTACAGGTCTTTTTGCTTTACCCAGTGGTTTACAATGTACTTGACAAATTCATAACAggagaaataaatgaagaaatccTTGATTAATGACAGATTCTGAGAATAACCCATACAGCGTGAAACTAAAACTAGCTGGTTTCTATCAACCCAAAAGAAAGATCTGGaacaatcaaaaaaataaaaaatcaaggATGATGTAGTTCCCAAATAACAAGATCAACGTAAAAACCATAGCTAATTgtggcatttaaataaaatccaaaatataaatgagtTTAAATGATTACGGTTTTGCTTATAATCACAGTGCTGTCTGGATTAATATTGCTGTGATGTGATAAACCCCAGCCCAAAGCAGAAATAGTTTGTCTCTGTGCTGTCTAGGTTACAGTTCTGAGCATTTGATACAGAAATGATACACAGTagcccccccgccccgcccctCCCCAGTCTACTCCAATGTAACATATCCTCACACAGCTTCCAAGCCAAAAATATCATTCATCTCATGTAAAggcagctttaaaaataataataataataaaaaaaaaaaatacatattttgtttcgTTACCCTGGGTTCAAATACACAGTACCcccttctaaaaaaaaaaaaaaaaaaaaaaagttaaacaccAAAGGTTTGAAAGCAACAAAGTACACAAAAGCAATCCAAATTGTGTCACAATCTTTATTAATCCAATAAGTGCTGGGACTTTCTTGGCGAGAGGTGAGGACTAGTACCCCCCAGTCCTACCTTCTCAAGTTGCTCTCCAAgatgtctttttgtttattatataggtttatttatttttaaatgatgacaCAACAGGAGGTAGACATATTATGTCCAAATTAGTTCGGTTTTGAACTGGTTGAAAAAGaaacgaaaacaaaatataaaatgtatcccCTATAGTTTCAGGCTACTCAGGAGTAACGACTGAACAACTGACAAAAGATTATTATGCTGGTGAGCCTCCGACTAATTCTAGAGTCCAGATCGTTAAAACTGACCAACTTTCTCATTGCTTCAACAAGAACACGCTCAAAAGACAGTATCTCAGAAATCCTGAATGCGATGACATCACTTTTCTGGTCACGTCAAACCAtggttgtgttttaaatgtaatttaaaatgttgaattcgACAAGAGGTAGTGATCAGTGTTATAAAAGGTGCTCCAAAATGAGCATTCACAGAATTTTTAGACAAGGGGTACTGCTATACCGATTCACTTATTCCTGTACCATTCACTTAAGTTAACAGATTTGCATTTTGATCCTTCTGTTTTAAAGATGAAGGCCGACAACGTTTCTGTCCCCTCTTCACTTATACTTTGAGGCCTGTTCGACTGTCCTAAACACCCCCCATCAAATTCTGTACCCCCCCCTTTAACCATTTCTAATTAACTGAGGTGGTACAGTCCAATTTCCTTTTGTCCAGAAGGCTTTGAAAACTAACACATTCCTTAAATCTTATACCTCCCTATTCcctcaaaacagaaaaaaatgattaacatcatccctgaaaatatatatttttaaggaacATTACCGATGCAACTTGcttttttaaacacttaaatataaaaaaaaacaaaaacaatttgccCTTACACAAAGTagtgcatagttttttttttttgttttttttttttttttttttaaacttcatacATTTCCTATTTTACAAAATTTGTTATGGAAGTAGAAAATACCCACTgtgctataaaatatatatattttttgtcagtttcacttttgtgtgtttttttttcttttggttttacGAATCTTTTGTCAGGCAGCATGTGGACAGCCCCCCCGCCCCTTCCCACCCCTCCCACCCTCCCCAGCAGGACCCTTAGTCCTTGACAAGCCTGTAGACATGATATTGCGCCCCATGTTCACTTGTTGACACCTCAAACACAAATGCTATGCAGAGCAATgtctcctgtgtgtctctgtttgttaCAACCTGAGGGGAAAAagataaagatatattttaaatatataaatgtaacatgGGTCTTGTGACTGTCGATGtactttattttgtgaaacaggTCTCAGTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57963 True 3046 lncRNA 0.37 2 41171725 41174790

Neighbor

gene id symbol gene type direction distance location
AMCG00013742 NA coding downstream 176317 40992789 ~ 40995408 (-)
AMCG00013738 NA coding downstream 244536 40889729 ~ 40927189 (-)
AMCG00013737 NA coding downstream 283274 40884954 ~ 40888451 (-)
AMCG00013733 NA coding downstream 524577 40641076 ~ 40647148 (-)
AMCG00013723 NA coding downstream 1266057 39900104 ~ 39905668 (-)
AMCG00013747 NA coding upstream 28274 41203064 ~ 41222134 (-)
AMCG00013748 NA coding upstream 48101 41222891 ~ 41227102 (-)
AMCG00013749 NA coding upstream 61516 41236306 ~ 41279477 (-)
AMCG00013750 NA coding upstream 122770 41297560 ~ 41360478 (-)
AMCG00013751 NA coding upstream 338814 41513604 ~ 41536486 (-)
G46484 NA non-coding downstream 67759 41099703 ~ 41103966 (-)
G46476 NA non-coding downstream 109901 41053148 ~ 41061824 (-)
G46459 NA non-coding downstream 185451 40983633 ~ 40986274 (-)
G46458 NA non-coding downstream 188168 40983132 ~ 40983557 (-)
G46421 NA non-coding downstream 570193 40601198 ~ 40601532 (-)
G46547 NA non-coding upstream 247981 41422771 ~ 41426128 (-)
G46555 NA non-coding upstream 267144 41441934 ~ 41442165 (-)
G46565 NA non-coding upstream 292232 41467022 ~ 41477661 (-)
G46630 NA non-coding upstream 606652 41781442 ~ 41788539 (-)
G46666 NA non-coding upstream 765644 41940434 ~ 41962922 (-)
AMCG00013732 NA other downstream 534497 40618343 ~ 40637228 (-)
G46423 NA other downstream 563197 40603601 ~ 40608528 (-)
G46418 NA other downstream 584333 40586816 ~ 40587392 (-)
AMCG00013730 NA other downstream 743100 40386061 ~ 40428625 (-)
G46333 NA other downstream 896627 40273391 ~ 40275098 (-)
AMCG00013773 NA other upstream 1253987 42428777 ~ 42455758 (-)
G46742 NA other upstream 1524716 42699506 ~ 42701068 (-)
AMCG00013820 tmem167b other upstream 2434492 43609282 ~ 43614579 (-)
AMCG00013846 NA other upstream 4164069 45338859 ~ 45344015 (-)
G47261 NA other upstream 4448448 45623238 ~ 45623895 (-)

Expression


Co-expression Network