G46547


Basic Information

Item Value
gene id G46547
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 41422771 ~ 41426128 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU58033
TATGGACAAAGGAAGGGCAGGTTTATTTACAGAATCAAAACAAAGAGTCACACAATAACCATAAACAACAGCCTGAATAATCTAAACTGTGACACAGATCCCTTGCAACACATATAACTAATaacacacaagacaaaacaGCAACCATGCAAATTTGTCCTCCAAATCCAAAGTCAAGTCCATAAGCAAAAGCTCAGTACCGTATTCAGTCGTCTTGCACTCTCTTTTGCTCCGACTCATCTGGCAtgcctccctgtctctccacaGCAGGACGCTGGTGTCTCCTTGTTTTAATGAGGAGGGGAGTCATTCATGGGAGAGCAGCCAGTCGGTTCCCCCTGTTAACTCCCCTCCCAGGTATCTGGGGAGGGACAGTGCCTCCCAGTGGAATAGTTTCCCCCCTCCAGGCACGGCATCACAATATGTCTTATTTGAGATGTTCTGTTTGTGTATTACTATGATGATTCTCAGTTTCAAtacttaattcattaattaatattaacactTTGGTTCACTATTATGACATTATAACCAATACTTCAtttgtactactactaattagaATTCTAcagatatacaaatattatggTTTTAgttaagaaacattttaagttAGAGTTAGTGTTAGAGTACAACTGTGTCCCAGTTGTCCCAATCAACAAGCAATACACTTATTTCTTACACATTGCCTTGTTTTATTCAGCCAtttgtatatgtacagtatgcaAGACACTTGGATCAGTAAGTTAGAATTACATAATATACCTTCTAAGAaacaataatgaagaaaaaaagactttaACGGATTTTATAAGTGTCCACATGCCATTTGGAAATGAACAGCTTTGAAATGTCCTTGAAATTCAGAGCTTTTAGGAGTGTATGGAAATTAGCATATTATCAAGCAAGCAGTTAAGACAAGAGTTCTGAATCACTTAGGCAGCAGCACCTCAGTATTATACCAAAGATGTACTGCACAGTATATTCAATGCATCGTTGTGCACATTTCTTATCTTTTCAATAGTTTAGTTGTAAAGTCACATGGTAGAATTTGCATCCTGCTGTGATATCAATAAATTAGATAAAGTACAAAGTGTAAAGCAGCCcagtattaaatgtaaaaagaacaGGGAAGGAATGTAAAGcaaggggaagaaaaagaaatgtaaaatttaaGACCGTGACATCTtgattattgtatattttacttttcttggACCCAAAATATTTTGGCTACAAACTTTGTTAATCATGTGTCCTGAAAATATTAAGACCTTTCAAAAATCTTTGAAATAGGATGACATACTGGAAAAAAAGAGCCTATTGGCTTCAGGCAAAATCCATTTTCAAGATCCTGACATTCTGTCTGGCACACATGACCTTCAGTACTGAGGTGGCTGTCTGCCTCGGTGACTCAGAGTGCTCCAAATTTGTTGCTAGTATAATACCATTGGGTGCAAATGGACGGTGGAATGCAGAAGTGACTGAAGCCAAGGTGACACGGGTATTTCCTGGCACTCTGCAGCCCAGGGCAGCTCTCTACTGGGAATGAGCCAGTGCCCCTGCACCCTGCCCGAATCCAAAGCCTTTTGGACCAAAGTTCTTGGCATAGCAAGCTTGCAGTAAATTTCTCCATCCTTGTCTGCCAAGGTGGTGGACTCCAGGCCCTTCCCACATTTTGCACAGCGGAAGCAGCTCTTGTGCCAGGCCTGGGGGGGTTGCAGAAACATGGTCACTTTGTTGTCTGTGGTTCCATTAACAATAGCATACACCAATAGCAGCCTCCAGGGACAGATGGGGCTGTAGTTTTGTACTTTCATAATCTCTGCGTGAAACATGCATTTTTGGATTCAGTGTTGTAGTAGTACCTATACAGCACCCCAAACAATAGTAGTAACTATGTTGCATCTTAATTAAGTATGTGCAAAGGATCAGACTTAACCTTAATGTTTGTATACACGCAGTCAATACAACAGCTTTGGAAGTGATTATTTAATGTTCACTGATTAGGTGTCGGGCTAATTCaaatttcattaattaaattcctcttgtgtttgtgttttgtatactCCTACAGACACCTGTTTCATGGTTCAGGCTGTTGAATCAGTTACGGTTGTCTTAAACCTCCCATTGCTTACATTTCCAGCTCCGACTACTTTCTCTGCTGCGTAGACCGACTTGCTGCAGCGTGGGCACACCTCGGAGTTCCCCAGCTTCTGAGCAAATTTCGAAGGGTTGGGGTTGGTGGTGGGGCGGTGGGGCATAGGTCTTCAGATTTGATACCCAGGCCTTCCCCTTTGTCCATGCTCAGTGTACCCGCGCCCTGTCCATAACCATAGCCTTTTGGTCCATGTTTCTTGCCATAGCAAGCCTTGCAAAAGATTTCGTCTCCATGAACTGCCACAGTTGTGCTGTCCAGGTTTTTCTTACACACCACTGAAACCACAAAGAGACATACAGGTTTAAAAATGGAAAGCCTCAATATGTACAGGACTTagttttttaatctctttcaaAAGTTAATGTGCCATTACCTTGATTCACGTATCTCACAAATTTCAA

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU58033 True 2565 lncRNA 0.41 3 41422771 41426128

Neighbor

gene id symbol gene type direction distance location
AMCG00013750 NA coding downstream 62293 41297560 ~ 41360478 (-)
AMCG00013749 NA coding downstream 143294 41236306 ~ 41279477 (-)
AMCG00013748 NA coding downstream 195669 41222891 ~ 41227102 (-)
AMCG00013747 NA coding downstream 200637 41203064 ~ 41222134 (-)
AMCG00013742 NA coding downstream 427363 40992789 ~ 40995408 (-)
AMCG00013751 NA coding upstream 87476 41513604 ~ 41536486 (-)
AMCG00013752 NA coding upstream 180853 41606981 ~ 41608265 (-)
AMCG00013763 NA coding upstream 362772 41788900 ~ 41802299 (-)
AMCG00013764 NA coding upstream 391917 41818045 ~ 41833392 (-)
AMCG00013762 NA coding upstream 408428 41834556 ~ 41863407 (-)
G46491 NA non-coding downstream 247981 41171725 ~ 41174790 (-)
G46484 NA non-coding downstream 318805 41099703 ~ 41103966 (-)
G46476 NA non-coding downstream 360947 41053148 ~ 41061824 (-)
G46459 NA non-coding downstream 436497 40983633 ~ 40986274 (-)
G46458 NA non-coding downstream 439214 40983132 ~ 40983557 (-)
G46555 NA non-coding upstream 15806 41441934 ~ 41442165 (-)
G46565 NA non-coding upstream 40894 41467022 ~ 41477661 (-)
G46630 NA non-coding upstream 355314 41781442 ~ 41788539 (-)
G46666 NA non-coding upstream 514306 41940434 ~ 41962922 (-)
G46708 NA non-coding upstream 1067888 42494016 ~ 42494563 (-)
AMCG00013732 NA other downstream 785543 40618343 ~ 40637228 (-)
G46423 NA other downstream 814243 40603601 ~ 40608528 (-)
G46418 NA other downstream 835379 40586816 ~ 40587392 (-)
AMCG00013730 NA other downstream 994146 40386061 ~ 40428625 (-)
G46333 NA other downstream 1147673 40273391 ~ 40275098 (-)
AMCG00013773 NA other upstream 1002649 42428777 ~ 42455758 (-)
G46742 NA other upstream 1273378 42699506 ~ 42701068 (-)
AMCG00013820 tmem167b other upstream 2183154 43609282 ~ 43614579 (-)
AMCG00013846 NA other upstream 3912731 45338859 ~ 45344015 (-)
G47261 NA other upstream 4197110 45623238 ~ 45623895 (-)

Expression


Co-expression Network