AMCG00013763


Basic Information

Item Value
gene id AMCG00013763
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 41788900 ~ 41802299 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013763
TGTTACTTGCTGGCAATATGAgcgatactactactactactactactactactactactactactaataataataataataataataataataataataataatagtattgcCGTAATGCTGACTGTTATAAATATCCAGATCAACTTCAGGAACATTTGAGTAGTTGCAAAgtaaaaatgctaataaaaaagCTTTGCCCTTTTTGGGTGCTGTTTACATGTCCCATTTCATATTGTGTGTTGATTCTTTCTCCTTTTATGTCGCGAGAGAATCAAGTTTCACTGAAAATAAGTCCGTTGGGGATGAAACGGGGGCTCCGAGGACAGGCTAAATCTTCCAGCGAGTGTTTATGAAATTCTCCCATGCAGAAGCAGATCTCCTAATCTCTTGGAATGTGAAGAACATGAGATCAGAAATTATggaggaataaaaaacaaaaatctcttaAAAGATTTGCCAGGGGGTGCATATCTAACGGTTAGTTCTTCCATTATAGATTTTGAAAAAGCACAGCTGCAGTGCTGCATGTGGACAGAACAGTTCTGGATGTTGAATCAGTTTTCAGGCTCCGAAGGGCAGAACACTCCTGAGTGGTGAACAAGCTATGTGGGTGAACTCAaactacaaatataaaaacaaaaaaactttcagATCTTCAGTCTCTACCATTGATTTACAGTCAAGTGGCCTGTTTGAACGGAGGCATAAATTAACACACATTAAACATACTTCTCATGTTGGAAAATGTGATCACTGATTGGCATTCAATTGCAAATCTTCCAATAGATTATTACCTCAAAAAGGCGACAATATCAGTGGTGGTTGAAATTTGTTATGTTTCCACACATGCACCCCCACCATCCCCAAGGTACACTGAATACCTCTGCCTCTTTACAAAGCAAAGCTCTCTATTGAATATTATAACCCAGATGCATCCGCATGGCCCATGCCTCAGAGTAGAGGTCATGCACTTAAGAAATGCCAGTTGATCCGTCATCATTGTTTAGGGAGCCGGTAGGGTGATAGATGATGGATTGGAAACCACACATTAGCAAGGAGGCGTCTAGCAGGCAGCAGAGGGGATCACAGTAGTCGAAAAAGAAAGCAATCACACGCAGCAGGCAGCGTATCAGTTTTCAGGGCCTTGTGCGTCTGGGGGCACGATCGGTTCACTCGGCTGCGGAGGTTTGGTTCAACACAAGATGAGAGGGAGCGTCGGGTTCTTACAAAAACATTGGCTCTGCTCAACGATGTTGCCCACTACAGTATTCAATCAAGCCCCAGCGCAGCTTGCCTTTCACAGAGACATTTATTTCAAACCTGACCGAAATGAAATTCCACGCTGCCCAGCACCTGCCTCTTCTGCAGAGAGCAGCCTTAAATAATCATTAGGAACCCTTTTACAATTTCCTGTAGCCGAGGCCTACTCTCAGCAATcgaaaaacaagcacacacatattACATATGAGAGGCTCAAATTGCTAACCAGGTTTTGAGATAcgcaagtgttttgtttgtttttttcatctgaAGTGCTTAGACCCTCAAaggatattattttgtttctaccACTCTGACAAGCTTATCAGCACATTAGTAATGGTCACACAAAAAGGGGACAGACTGCAACAGAGCTGGTTCAACACACTGTAACAAACTGACGTAATGCCTGTTAATAAATCTGTCATTGTAATAAACCCCTGCACTAAGTAAGCCAAGACTATGCAGTACATAGTTCTGAGTGCTACAAATAATCCAATCTAATTGGATAGAATCATGCCAGGACTGAATCCAGCCTCTTGTCACACTAAATTTAAACAGGATTGCATTACAATGTTTCCCCAAATACTTATTCATATTACAGACCTTAGTCCCCTCCAATCAAGGTCAGTGGACATTTATTGGACAGTTACTGTATTGCATCTGGTATACAGTGGGCtgtttctttgtatgtttttaagtgtCAAATATGTGCTTTATGTGTATAAATTTACATTAATTGCTTGacacaaattttatttttattttacagcatgaTCGGACCTCCAGGTaagcaattattttttcccctcacattTCTCTCATGCCTTGTctctttattgcattttttattatcacATCGTACTCCTGTATATCTTTCCTTCCTTTGGTTTTTATATAGTTTAGCACTCTTAGTCATGAAAGGCTATCACACCTATAGGCAAAGTTTCAATCCCTGCCCCTGGTACAGTCAGCACAGTTCTTTGCACTGCATACAGCCCACATGCATACAATAGAAACAGGTAATAtaattctcttttctttctgcaCGTTAGAGATTCCCTCATCTTTCCATGTACTCCAAAAACAATAGGCAACAGTGACCTCATGATTGAGCCCAGTTGCTCCCTGCTGCACAAATAAACTGACATGCATGTATAGAAGCCCTGCGCTAGATTAATTTATCACACACAGCGTTTGCCTCCATCTGCTTTGAGTGACTGTAACCCTGACAGAGTCAGTTTGGCACAGCGGGTCATACAGGGCATCAACCACCTTAGGACCCTAACTACTTGTGTAATGACTTGCTTTGCATTTCATTAGTCAGCTGGAGATTTTCCTCACAAATCCATTGTCCTCTTCAGTgagttgttgtgtgtgttaagATTACTCGATACTCGTGCTGTTATTGATCAACTTAGTGTAGTGGCACATCTGTGCAGTGATGCATTTCTTCCAATACAAGCATGTCCAGATGCAACCGCTGGAGTATTTCCAAACCTATCCTTCAGCAGCGTCTTCCTTTCTCCAGGTCTGAAGGATCTCCCAATATCTCACATCTGTAAAAGCCTGCGTCATGCCAGCCTTaatctgtgtgtgcatgccAACCATATCGCTTTCTTTCAAGTGTCAGTTTGCTTTACTAAAAATTACAAACCGAGTTCAGAAAGAGAATAGAGAAACAAAAGTGCATGCAATGTGACTTCCTTCTCATCcttattttaacatcttcatTCTTGTGAAGCAGATTTGTTGAGCTAAAAGCAAAAGCTACAAAATATGTTGCAACTAATAGTAGTTAATGACAGACTATTCTGAGTGTTTAGACAGAACTGCctaaaaagacaaggaaaacaaactgtactttTACCTCAATTAAACTTTATGTATACTTTATAATCAACAGCCccaaaaacagaacacaaatgtCTAAAACAGAAACTGATAATAAGCCGACAggtttccatttccttttctaCTGTTAAGTATACCAcatgagaaaatgtattattttaaagcatgggTTTAGCGGATTACAGGAGGTTTAATACCATCCATTCTTCATGATTCATGTGGCATTTGACAACTCGCATACTTTCCCATTTTTAGAAGCATTTTGTTAGCATTTATGCAATGGCAGATACTCCACAtttcaaacaataattaagtcACATGGTTGATTTGAGAAAACAGCTGCAAATAGATGATATCTGCCTTgtacacaaagaaaatataaacatataaatataaattatttggaTTCTAGATATTTTGCCAACAAAATACTGtatcaatgtaaaatataactttGTATATCGCTGAAATGCAATGTTAAGTGATGTGTACCATCCATTAAAGGCTTTAAAGTTGAGCCATTAAGCAAACTTGCCAACATATGTTGTTCATTAAAAGAATAAGGCTCAGGTTAGCCTAAATTGTATGCTTCTATTAATTATTGTTCTTTAGTGTGATTATTATATCCTGATCAAAACAATTCACAGCACTTGAAATATTTTGGCTTTTTTAATTGCATCCCAACAAAACATCACATCTTGTCCCTCCCTGAGAATTGCATGTATTGCCCCCCCACTTAAATGAGATAGAAACAATATTCACCTGAACTTCGTAATGACTGAATCCTACATTTGCTTTATTCAGTTACAAGCATGTTCTGCTCTGATCagccaaagcattttaaactacatgtttaaaaaatatgttttttggaaatgctgtttgtacaaaatgatccattttgtttagttgttcCCTTGTGTCTGTCTCCAGGCTCGACACCTCTAGTTCAGGAGACAGTACGACAGACAGACTGCTGGGCCGAACCAGCTCCTATACCCGACGTGAAAATCGCCTGGCTTCTCTGAGCAAGGCTGATGAAGAGGGGAGCAGCAAAGACTACAAGAAGATGTACGAAGACGCCTTGGCTGAAAACGAAAAGCTGAAATCCAAGTTGGATGAGAGCAAGCAGGAACTCGCCAAGATCAGGACTCAGCTGGATAAAGTCACAAAGAGGCAAGACAGAATATCTGAAAGGTCTGGTGTACTTGAGACAGAGAAAAGGAGCACCCCCCAGCTGGCCCAGGTTCAGGCTCTGCGGAGGGTGAACGAGCGGCTCGTGGCAGAGAACAGAGCCATGATGCGGGTTGTCGCCAAGTTGTCGGAGGTTTTAATAGAACTCAAGTCTGATAACCAAAGACTGAAAGATGAAAACGGAGCCCTGATTCGTGTCATCAGCAAGCTGTCAAAGTGACACCGCCTGGGCAGAGAAGGACACAAACAAGCACTTCCACTGCCATGCGCCCACACGCAGGGCCATGGACTCCACAGTGCCACCTGCTGACTCACTGCGGCTCTGCAATCACTACAAAGCTGCCTGCAAGCCACTCTCACTGCTGTAGAGGAAGCTAGGTCATAGACTTGTCAGCCATGGGCTTACTCTGATGGTGGCCAGGGCTTGGTTCTCATTACATGCTGGATGACATCAGCCTTGAGTTCGGTGGAGCATCTCCATGGACACTACAAGAAGCCTTTTCTAGGGACAGGAGAAATCCTATCCTGATGAAATAAGGAAATTCTACAGAATAACAACTAACAGTGCATCCCGCTAAGGCCTTTCCTCCTATTTTGCTTTCttgcacaaaaaacacaaactttctATAAATGAAATAACCATCACCCAAGAGAAGGTTGGGTTAGAGCAATCTTGGGGCCTCAGTTCAAGTAAACATGTAGGCTGTTGTTAGAAGTATATGATGAATTTGGTTTACTTCCCCCATGTGGGTAGAAGTACCTTCATTAGGACTTTCCAATGTTACAATGCCCATTCCATGCTTTTTAtggacatgtttatttattatttttagatggCTTATGGttctaaaatatattacttcataataataatacaaatccagcACACAGACAGTACCACATTGCTTAATGATAATATATGCATGCTGGTACAACTATACACACACCATTAAATATGGCAATATGCATTTCCCATTCTGATCGTAGCAAGACAAAAATGAACACAGATGAGAATCCATGCATAGCCTAAATCTTAGTTTCCTGTCATACTGCCAGTCGTTtgccaaaatgtaaaagtgtagTTTACTGGTATGGAACTTAGAGCTctgtacatacatatgcataagAACACCCATTGAAAAAAGCATGATCAATTAAGACTCTTTAAATTAAGACATCTTACCCAGAATATGAAAGTTGGATTTTGATTGGACTACTAGGCTACATGGCTCTCTCATCCTACCTTGGTTTCTGCTGATCATACTGTTAATTTTCAAGGTGGCAGTTTGAAAACCTCTGGGCAACATTAATAATCTCAATATAAGAGGCGTTGACTTTTATATTTGCTTGATGTGCCTTGTTCATTCgacttgataaaaaaaaagagtggAGTTTCCATGTATAGAAAGTACttgtgtttcatatatatatatatatatatatatataaataaatatattttaacaacattaCAAATGGAATGTGACACCAATAAAAAGCgctgtaattaaaatgctgaatctttttcttaaaaagtattattatttccaacTAAGCCTCATCATTGGAATACAACTGTACCCAATTCTTCAAAGATATACTATAACTTTAGATAAACATTTCATTGAAATAAtagcaaaaataattatttgacttaatttagtattttgcaTAATTATAAGTGCAATTGAAATCTGCATTAAGAGTAAACAGTAGCATACACTAGGTGAATCTGCTTTTGTTGGTTTCTTTGCTTtaatagttgtatttttaaattgtagacaGCAGTGGCAGAATCCATACATATGGGGCCATTCAAACCACAGTGACGTAATTGTACGGATCAAACCAAATGGACCGAGACCAGAAGATAGGAGGTGATCACGGTTCTTTCAAAAAGCGATCTCAATTTATTTTGCAAGGTGAAcgcaaatgcattcaaatgcaTTGCTGAAGTGACGGACTCAAATGTACACATGTGGGGTTAGTGGATCTGCAGATAAAAACACTTTACTCAAAGTTCAACAAGGTTTCTCCCCCTCAATACCAATATGATACCTCCTGAAACAGTTCAATGGCAGTAATGTAGCGCATGCTTTTGGTAACtttaatgaacaataaataTAGGTGTTGTATTTAGTTTCCGTGGCTTCTGCACTGCAATCTGTAAACATGCACCACTGTATAtcttatttgtaaattaagttCATCCTGCGGTCTTTTCAGTAAATTCTCCGCTGACTCAGACATAGAAGCTGCTCCAGGCGAGAGTGGAATTTAGAATCTTCTTCAAAATGACGTAAAACCCGCCACTGaaataacagatttttattCCAGTGCATTGGTTACTTTTAATGCGATGCAACAGTTCCATTAGACTCATGGTGCTCCTAATTGTAACCGTGTTCACCAAACGGGTGATTTGGTGTAATTGTAAACGTCTCTTTATATCACCCAGAGCTCTACACTGCGCCACACAGAGCGCATGCGCGGAGCAAGACAGATCCCAGCCAGCTTTGCAGTTCTTAGATAGCGTAGTGATGTTGTAGTAGGGAAGTACTGTAATCGCGAAATGAGAGGCGATGCTTGTTCTTTGAGGAGAAAATGAAGGGGGCAGAAGAAAACATACTTGCATGATATGATAACGTGGtaatataatacacattaaatcGATATTATTCTCGTCATTCTAATTGCGTCTGGCCAAGCTCAGCTGACCGAGCTTACTGTGACTGCTCACCACTGCGCCTGCCTATGTGACATTTAACTCATTTTACCATGAATTTGTTGCCATTCTTCCATCTTGACTGAATTCAACTGATGTTTGTCTGCTTTCTTCCTCAGATCTCCACGAAATCTGACAGGTCGACtcacatgcatacacatttgcatttttaattagtatagTCTTCTACGAGtaacacattttgtgcacaGTGCCACCCAAAGGGTATTATTTACAATTGCAATTTTAGTAAATTTTTAGTTAAATATGCTGCCAAATTGAAATGTAGTATTAaactactgtttaaaatgttttaattattttctatttttatttaagagaTACTTTTATGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013763 True 7389 mRNA 0.39 5 41788900 41802299

Neighbor

gene id symbol gene type direction distance location
AMCG00013752 NA coding downstream 180635 41606981 ~ 41608265 (-)
AMCG00013751 NA coding downstream 252414 41513604 ~ 41536486 (-)
AMCG00013750 NA coding downstream 428422 41297560 ~ 41360478 (-)
AMCG00013749 NA coding downstream 509423 41236306 ~ 41279477 (-)
AMCG00013748 NA coding downstream 561798 41222891 ~ 41227102 (-)
AMCG00013764 NA coding upstream 15746 41818045 ~ 41833392 (-)
AMCG00013762 NA coding upstream 32257 41834556 ~ 41863407 (-)
AMCG00013769 LOC106572428,LOC106964720 coding upstream 305652 42107951 ~ 42109350 (-)
AMCG00013766 grm4,LOC102228039,LOC106903978,LOC103464721,LOC108231655 coding upstream 321746 42124045 ~ 42128534 (-)
AMCG00013765 LOC106567287,LOC106572369 coding upstream 369028 42171327 ~ 42177706 (-)
G46630 NA non-coding downstream 361 41781442 ~ 41788539 (-)
G46565 NA non-coding downstream 311239 41467022 ~ 41477661 (-)
G46555 NA non-coding downstream 346735 41441934 ~ 41442165 (-)
G46547 NA non-coding downstream 362772 41422771 ~ 41426128 (-)
G46491 NA non-coding downstream 614110 41171725 ~ 41174790 (-)
G46666 NA non-coding upstream 138135 41940434 ~ 41962922 (-)
G46708 NA non-coding upstream 691717 42494016 ~ 42494563 (-)
G46711 NA non-coding upstream 752318 42554617 ~ 42554906 (-)
G46712 pacsin1a,pacsin1b,LOC108427734,LOC106566012,LOC107587581 non-coding upstream 755486 42557785 ~ 42558015 (-)
G46713 NA non-coding upstream 760341 42562640 ~ 42563406 (-)
AMCG00013732 NA other downstream 1151672 40618343 ~ 40637228 (-)
G46423 NA other downstream 1180372 40603601 ~ 40608528 (-)
G46418 NA other downstream 1201508 40586816 ~ 40587392 (-)
AMCG00013730 NA other downstream 1360275 40386061 ~ 40428625 (-)
G46333 NA other downstream 1513802 40273391 ~ 40275098 (-)
AMCG00013773 NA other upstream 626478 42428777 ~ 42455758 (-)
G46742 NA other upstream 897207 42699506 ~ 42701068 (-)
AMCG00013820 tmem167b other upstream 1806983 43609282 ~ 43614579 (-)
AMCG00013846 NA other upstream 3536560 45338859 ~ 45344015 (-)
G47261 NA other upstream 3820939 45623238 ~ 45623895 (-)

Expression


Co-expression Network