G46711


Basic Information

Item Value
gene id G46711
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 42554617 ~ 42554906 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU58230
ccAAGGAGGAGGAATGCAAAGTGATGAATGCTGGGGAAGTGCACATGTTGATGGATAAGTCACACACAAGATGGGGTTTTCCTCCACCTGAACCTCAGTTTAACATGCCATTAAGAACATTAAGAGCCGGTGGGAGCTGAGAATATTTCCCTGGTTTTACCTCCCAGAAGCTGTCTGTGGCCTCGGGGTCAATGCTTGCGGATTCATCGTAGGAGCCGGACATTTTCCTATATGTGGAAGAGGAAGCTGGAAGCTGGAAGTGTCTTCACCAGAGCTGGGATCTTCATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58230 True 290 lncRNA 0.49 1 42554617 42554906

Neighbor

gene id symbol gene type direction distance location
AMCG00013775 rps10,LOC107595410 coding downstream 54921 42496085 ~ 42499696 (-)
AMCG00013772 NA coding downstream 79198 42468731 ~ 42475419 (-)
AMCG00013767 LOC102199361,LOC101471251,LOC102312415 coding downstream 233011 42319461 ~ 42321606 (-)
AMCG00013768 LOC106572369,LOC106566015,LOC103467650 coding downstream 317184 42233455 ~ 42237433 (-)
AMCG00013765 LOC106567287,LOC106572369 coding downstream 376911 42171327 ~ 42177706 (-)
AMCG00013779 NA coding upstream 28913 42583819 ~ 42597809 (-)
AMCG00013778 cunh6orf106,LOC107696455,LOC107724532,LOC107666165,LOC107595408,LOC107744375 coding upstream 89624 42644530 ~ 42655006 (-)
AMCG00013781 taf11,LOC107673466,LOC107554211 coding upstream 140931 42695837 ~ 42699033 (-)
AMCG00013784 NA coding upstream 268232 42823138 ~ 42832422 (-)
AMCG00013790 timm17a coding upstream 392176 42947082 ~ 42953954 (-)
G46708 NA non-coding downstream 60054 42494016 ~ 42494563 (-)
G46666 NA non-coding downstream 591695 41940434 ~ 41962922 (-)
G46630 NA non-coding downstream 766078 41781442 ~ 41788539 (-)
G46565 NA non-coding downstream 1076956 41467022 ~ 41477661 (-)
G46555 NA non-coding downstream 1112452 41441934 ~ 41442165 (-)
G46712 pacsin1a,pacsin1b,LOC108427734,LOC106566012,LOC107587581 non-coding upstream 2879 42557785 ~ 42558015 (-)
G46713 NA non-coding upstream 7734 42562640 ~ 42563406 (-)
G46714 NA non-coding upstream 9624 42564530 ~ 42569885 (-)
G46731 NA non-coding upstream 131803 42686709 ~ 42686979 (-)
G46732 NA non-coding upstream 134182 42689088 ~ 42690442 (-)
AMCG00013773 NA other downstream 98859 42428777 ~ 42455758 (-)
AMCG00013732 NA other downstream 1917389 40618343 ~ 40637228 (-)
G46423 NA other downstream 1946089 40603601 ~ 40608528 (-)
G46418 NA other downstream 1967225 40586816 ~ 40587392 (-)
AMCG00013730 NA other downstream 2125992 40386061 ~ 40428625 (-)
G46742 NA other upstream 144600 42699506 ~ 42701068 (-)
AMCG00013820 tmem167b other upstream 1054376 43609282 ~ 43614579 (-)
AMCG00013846 NA other upstream 2783953 45338859 ~ 45344015 (-)
G47261 NA other upstream 3068332 45623238 ~ 45623895 (-)
AMCG00013882 cry4,LOC108413014 other upstream 3364730 45919636 ~ 45928309 (-)

Expression


Co-expression Network