G46565


Basic Information

Item Value
gene id G46565
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 41467022 ~ 41477661 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU58057
TAATAAATCTATATTCCATGCATTATCCTATGGTATATTTTAGGATGTTTTGTTCCTACTCACGCTGTTTTTGACTGATGTAGTGGAGTTCCTCAGCTCACACCTCTGTGTCTCAGCCTTCAGTTCCTTTCCCCCCAGCCTGTCCTCTTGCCCCTTGTCCTCAGCTTCCTGACCCATTTCCGGCATCTCCTCCTCTCGTTGCTGCCAAAGTGTCTCCACGTGTCTCTTCTTCCTCCGCTCATCCCTCGACTTCAGAATCTCTAGAAATTCCAAGTTGGTTTGGTCTTCAGTACCAGAGTCGTCCCCAGCACTGTTTGGTTGCGGGGCTGTGTCATCTTGGCTTGAGTCAGAGGGATCAAATACAGTGCTGTTTCTaatccttctcctcctctcacGCTCAACTTCCTCCTCATCCTCAACCGTCCACTGGCGAGTTAGACTTGAAAGCGCAGACCAATTCTTCCGACTGAACGACATGTCTGCGTCTTCTCCGAGTCAAGTCTTAAAACAGAAGAGTTaccaaaacatacaaatatatatatatatatatatacccagaCCAGACCGTTACTTGAGTGTTTTTCAGCAATCCTCCATAATCCAAATCCACTGGCACTGTAAATCTACCTTTACCCTGCACGGCTGAGAGAGGTCACATGACTTCTGTTATCTGTGTGTGGAGCTGTAATTTACCTATGCGCAGTACCTTGT
>TU58058
GGATCTGGGGCTCTGATGCTTGATTGGACTCTCCCCAGGCTGCTCAGAGCTTCTCgtaaaCTGGTTGTCTCCATTCTCTCTTATCTCCTGGGACCACCTTGGGCTGTGTGTCAATCCCTGCCCTGGTGGGCTGGTGGGACTCAAGGGGGAGATGACTCTTCCAGTGGGGGACGTGGGGGTCTTATCTAAAGAGAAGGAGAGCGAGCTCTTGAAAACCTTAGATGATCTGCTCGGGGACTCTTTGTCTGTTTCTTGGTTGGTCTTGGACTCAACATTTCCATtGCTGTTTTTGACTGATGTAGTGGAGTTCCTCAGCTCACACCTCTGTGTCTCAGCCTTCAGTTCCTTTCCCCCCAGCCTGTCCTCTTGCCCCTTGTCCTCAGCTTCCTGACCCATTTCCGGCATCTCCTCCTCTCGTTGCTGCCAAAGTGTCTCCACGTGTCTCTTCTTCCTCCGCTCATCCCTCGACTTCAGAATCTCTAGAAATTCCAAGTTGGTTTGGTCTTCAGTACCAGAGTCGTCCCCAGCACTGTTTGGTTGCGGGGCTGTGTCATCTTGGCTTGAGTCAGAGGGATCAAATACAGTGCTGTTTCTaatccttctcctcctctcacGCTCAACTTCCTCCTCATCCTCAACCGTCCACTGGCGAGTTAGACTTGAAAGCGCAGACCAATTCTTCCGACTGAACGACATGTCTGCGTCTTCTCCGAGTCAAGTCTTAAAACAGAAGAGTTaccaaaacatacaaatatatatatatatatatatacccagaCCAGACCGTTACTTGAGTGTTTTTCAGCAATCCTCCATAATCCAAATCCACTGGCACTGTAAATCTACCTTTACCCTGCACGGCTGAGAGAGGTCACATGACTTCTGTTATCTGTGTGTGGAGCTGTAATTTACCTATGCGCAGTACCTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58057 False 711 lncRNA 0.46 3 41467022 41472543
TU58058 True 930 lncRNA 0.49 6 41467022 41477661

Neighbor

gene id symbol gene type direction distance location
AMCG00013750 NA coding downstream 106544 41297560 ~ 41360478 (-)
AMCG00013749 NA coding downstream 187545 41236306 ~ 41279477 (-)
AMCG00013748 NA coding downstream 239920 41222891 ~ 41227102 (-)
AMCG00013747 NA coding downstream 244888 41203064 ~ 41222134 (-)
AMCG00013742 NA coding downstream 471614 40992789 ~ 40995408 (-)
AMCG00013751 NA coding upstream 35943 41513604 ~ 41536486 (-)
AMCG00013752 NA coding upstream 129320 41606981 ~ 41608265 (-)
AMCG00013763 NA coding upstream 311239 41788900 ~ 41802299 (-)
AMCG00013764 NA coding upstream 340384 41818045 ~ 41833392 (-)
AMCG00013762 NA coding upstream 356895 41834556 ~ 41863407 (-)
G46555 NA non-coding downstream 24857 41441934 ~ 41442165 (-)
G46547 NA non-coding downstream 40894 41422771 ~ 41426128 (-)
G46491 NA non-coding downstream 292232 41171725 ~ 41174790 (-)
G46484 NA non-coding downstream 363056 41099703 ~ 41103966 (-)
G46476 NA non-coding downstream 405198 41053148 ~ 41061824 (-)
G46630 NA non-coding upstream 303781 41781442 ~ 41788539 (-)
G46666 NA non-coding upstream 462773 41940434 ~ 41962922 (-)
G46708 NA non-coding upstream 1016355 42494016 ~ 42494563 (-)
G46711 NA non-coding upstream 1076956 42554617 ~ 42554906 (-)
G46712 pacsin1a,pacsin1b,LOC108427734,LOC106566012,LOC107587581 non-coding upstream 1080124 42557785 ~ 42558015 (-)
AMCG00013732 NA other downstream 829794 40618343 ~ 40637228 (-)
G46423 NA other downstream 858494 40603601 ~ 40608528 (-)
G46418 NA other downstream 879630 40586816 ~ 40587392 (-)
AMCG00013730 NA other downstream 1038397 40386061 ~ 40428625 (-)
G46333 NA other downstream 1191924 40273391 ~ 40275098 (-)
AMCG00013773 NA other upstream 951116 42428777 ~ 42455758 (-)
G46742 NA other upstream 1221845 42699506 ~ 42701068 (-)
AMCG00013820 tmem167b other upstream 2131621 43609282 ~ 43614579 (-)
AMCG00013846 NA other upstream 3861198 45338859 ~ 45344015 (-)
G47261 NA other upstream 4145577 45623238 ~ 45623895 (-)

Expression


Co-expression Network