G72789


Basic Information

Item Value
gene id G72789
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31003372 ~ 31003788 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU90969
CTGGTGCATTGgcaatattttctatttattttctacaactGTGATTTTCGTGGGCAGTGTGTATCGTAAAGCAATCCTCTGTCACGTGTCCCCGACTGTCCCGGTCTCTAGGGCCATAAATACCCGATCCAAAACCACTGACCAGGGCAACGGTTATTGCTGCCCGTCCCTCTGATTTTCTTGATTGCTCGACTAACGTTTCTGATTCAAGATCACTCTCTTTTCGCAGCCATCTTACTCGAATTCCTCACTCACACCCTCACGCAGGGCGTTATGACGTCCTCCGGGAACCACTGCTCCACGCAGCACGTCTCCCCCGcccccttctccttctccttccccttcACTTCACTCCTCGTCCTCAAAGAAGCACGTTATCAAAGAGCAaaggtcgcgttcttgtagcgcagatttccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90969 True 417 lncRNA 0.51 1 31003372 31003788

Neighbor

gene id symbol gene type direction distance location
AMCG00014781 NA coding upstream 85806 30907169 ~ 30917566 (+)
AMCG00014771 NA coding upstream 152230 30847172 ~ 30851142 (+)
AMCG00014768 NA coding upstream 262228 30728363 ~ 30741144 (+)
AMCG00014774 NA coding upstream 292952 30700206 ~ 30710420 (+)
AMCG00014779 NA coding upstream 342777 30659601 ~ 30660595 (+)
AMCG00014784 NA coding downstream 19755 31023543 ~ 31027002 (+)
AMCG00014783 NA coding downstream 38103 31041891 ~ 31044741 (+)
AMCG00014787 vangl1,LOC106574540 coding downstream 237513 31241301 ~ 31264255 (+)
AMCG00014788 poglut1 coding downstream 293962 31297750 ~ 31308262 (+)
AMCG00014792 NA coding downstream 309185 31312973 ~ 31330675 (+)
G72783 NA non-coding upstream 47088 30955905 ~ 30956284 (+)
G72769 NA non-coding upstream 156951 30846162 ~ 30846421 (+)
G72768 NA non-coding upstream 158702 30841560 ~ 30844670 (+)
G72767 NA non-coding upstream 166203 30836836 ~ 30837169 (+)
G72426 NA non-coding upstream 1811094 29191971 ~ 29192278 (+)
G72815 LOC103352915,LOC107742653,LOC105893249,LOC107739823,LOC107667646,LOC107552369,LOC107700101,LOC108434690 non-coding downstream 274299 31278087 ~ 31287434 (+)
G72861 NA non-coding downstream 458358 31462146 ~ 31463811 (+)
G72875 LOC103376870 non-coding downstream 520527 31524315 ~ 31592105 (+)
G72911 NA non-coding downstream 698374 31702162 ~ 31702435 (+)
G72912 NA non-coding downstream 699358 31703146 ~ 31703573 (+)
G72787 NA other upstream 7009 30990063 ~ 30996363 (+)
G72786 NA other upstream 23120 30979570 ~ 30980252 (+)
G72785 fam160a2 other upstream 24547 30978216 ~ 30978825 (+)
AMCG00014777 NA other upstream 191085 30764351 ~ 30812287 (+)
G72605 NA other upstream 1151551 29851450 ~ 29851821 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other downstream 139635 31143423 ~ 31147877 (+)
AMCG00014793 NA other downstream 509020 31512808 ~ 31523187 (+)
G72925 NA other downstream 713330 31717118 ~ 31754930 (+)
AMCG00014799 NA other downstream 787113 31790901 ~ 31798463 (+)
AMCG00014811 NA other downstream 935765 31939553 ~ 31962971 (+)

Expression


Co-expression Network