AMCG00015667



Basic Information


Item Value
gene id AMCG00015667
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 15792513 ~ 15814359 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00015667
GGTGGGGACTCTTTCCGATGTGGCGAGCACGGCCGCCTCTAGTCCCGCTCTGTGCTCCCTGGACTGGCCCGGACCGGACCGGACCGTCTCCGCTGCGCTGCTGTCAGCACGGACACAAACCCGCCGGGGTCCGTGTGGTGCCATAGCGATCTCACCGGGCCTTCGAGGGGCAGaGAAATGAAGGGATTATTCAAGACGGAAGCCAGTCCTGGTTTCTCCCACAAGACGTGCTTTTGAGGATTTGAAAAACGCAAAACAAACCCCAATAAATCCGGCGCAGAACAGACCAGGCGGCgatagttgtttttatttgtattattattttcatttttccacaTCCGACACAAGCCCCGCGGCTGGGTTGGAGAGTCGGCCATCGGTCTTCCCGTAACGGCCAAACCCAGTTTAGGCCCGACTGCTCTTCCCGAAGCCCCGGTCTGTCGTGATGACGGAGCCCAAAGCGCCAACACCGACCCCGGGGGATACATACAAAGGGTGGCTGTTCAAATGGACCAACTACATCAAGGGCTACCAGCGGCGATGGTTCGTCCTGAGCAACGGCCTGCTGTCTTACTACAGGACACAGGCAGAGATGGGCCACACCTGCCGGGGCACTATTAACCTGGCCACGGCCAACATCGCGGTGGAGGACTCCTGCAACTTTGTCATCTCCAATGGTGGCGCGCAGACCTACCACCTGAAGGCCAGCTCCGAGGTGGAGCGGCAACGCTGGGTCACCGCCCTGGAGCTCGCAAAAGCCAAGGCCGTGCGCATGCAGGCTGAATCAGacgACTCTGGCGATGACGACCCCACAGTGGCACAGGGCGGGGCAGGGGGAGCAGGCGGGGGAGGTGGAGGCGGCGGTGGCGGGGGGGCAGGTGGAGGGCTTGGGGACCGAGCGGAGGTGCAGTCCACCCTGCGAAGCCTGAGCAGCAAGGTGGAGGACCTGAGCACCTGCAACGACCTCATCGCCAAGCACGGCTCGGCCCTGCAGCGGTCTCTCAGCGAGCTGGAGGGGCTGCGGGGGGGGGCGGCCGACCCCACGGACAAGATCAGGCAGGCATGCCGTGATTTCCTGTCGTTGGCGCAGTCACACAGCCGGCGCTGGCACAAGGCTCTGCAGTATGAGCGAGACCAGCGTGTGCGGCTGGAAGAGACGCTGGAGCAGCTGGCCAAGCAGCACAACCACCTGGAGAGGGCCTTCCGAGGGGCCACCgtcttcactctctctctctgcccaccCTCAGGTGTGTCCCCAGGTAAGGGAGACCTGAGTGATGAGGACGACGAGAACGAGTTTTTTGATGCCATGGAGGATGCCCCCGAATTCATCACTGTCCCCGCAGACCCCAAATACCACAAgagGTCGGGCAGTAATGTCAGTGGCATCAGCAGTGAAATGGGAATGGATGATAGCAGTCTTGATGAGCAGCATTTGGCGACGAATAGCGAGTCGTCCCAGTCCAAGGAGCTGGACCTGGAGTACTCGGAGCTGCTGGATCGGGCGGCCAAGTGCGAGAGCGCGCTGGAGCAGCTGTGCTACGTGGCGGCCTTCACTGTGTCGTCCTACTCCACCACTGTGCACCGCACCGGCAAGCCCTTCAACCCCCTGCTGGGTGAGACCTTCGAGCTGGACCGACTGGCTGAGAGGGGGTACCGGTCACTCTGTgaacaggtCAGTCACCATCCCCCGGCAGCAGCGCACCATGTGGAGTCGGAGCGCGGCTGGACCCTGCGGCAGGAGATCGCCCTGGCCAGCAAGTTCCGTGGCAAATACCTCTCCATCATGCCTCTGGgtaCAATCCACTGCAGTTTTGCCAAGAGTGGGAATCACTACACCTGGAAAAAAGTGACCGGTGTGGTGATGGATGCAGCAGGCAAGGCCCACTTCGTGCTTTCGGGCACCTGGGACGAGAAGATGGAGTTCAGTCGTGTTATGCAGAGTAGCCGGGGAGAGAACGGCACAGAGGGCAAGCACAAAACCGTGTACCAGACACTACGGGCCCGCGAGCTGTGGAGGAGACACCCCCTGCCggaGGGGGCCGACAACATGTACTTTTTCTCCGAGCTGGCGCTGACCCtgaatgaggaggaggagggcgtGGCACCCACAGACAGCCGGGCACGGCCGGACCAGCGGCTGATGGAGCAGGGCCGCTGGGACGAGGCCAATGCCGAGAAACAGCGTCTGGAGGAGAAGCAGAGGAGCGTgcggaggaagagggagagtgaAGCTGTCCGTGCGGTGGAGGAGGGCGTGACAGTGCTGCTGACAGGGCAGCAGGCCCGTGTGGTGGCCATGCTGCCTGCCGGACTGAGCTGGACTACAGGCTGGCTGGAGAACCTGTTTGCGtTGATGCAGATGATAGTCCATCGTCTGATACTGTGGAAAGCAAgccCCCATGTGGACAACTACAAGGCCATGTGGTTCGAGCGCTGCAAGGACCCAGGCACAGCGAGGAAGTGGAGGAGGAGTGAGCAGTGA

Function


GO: NA

KEGG:

id description
K20456 OSBP; oxysterol-binding protein 1

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00015667 True 2485 mRNA 0.61 17 15792513 15814359

Neighbor


gene id symbol gene type direction distance location
AMCG00015664 NA coding downstream 234737 15555165 ~ 15557776 (-)
AMCG00015662 NA coding downstream 453451 15338036 ~ 15339062 (-)
AMCG00015658 NA coding downstream 547619 15236134 ~ 15244894 (-)
AMCG00015655 NA coding downstream 684488 15094120 ~ 15108025 (-)
AMCG00015652 NA coding downstream 836683 14949243 ~ 14955830 (-)
AMCG00015672 NA coding upstream 243443 16057802 ~ 16060001 (-)
AMCG00015676 NA coding upstream 438060 16252419 ~ 16272647 (-)
AMCG00015677 NA coding upstream 501129 16315488 ~ 16324527 (-)
AMCG00015680 NA coding upstream 631613 16445972 ~ 16448187 (-)
AMCG00015683 NA coding upstream 646363 16460722 ~ 16463940 (-)
G99535 NA non-coding downstream 38487 15753816 ~ 15754026 (-)
G99516 NA non-coding downstream 159905 15632395 ~ 15632608 (-)
G99513 NA non-coding downstream 227122 15565126 ~ 15565391 (-)
G99476 NA non-coding downstream 478060 15314153 ~ 15314453 (-)
G99424 NA non-coding downstream 610527 15053296 ~ 15181986 (-)
G99565 NA non-coding upstream 65059 15879418 ~ 15883521 (-)
G99576 NA non-coding upstream 88092 15902451 ~ 15959831 (-)
G99594 NA non-coding upstream 172725 15987084 ~ 15990263 (-)
G99596 NA non-coding upstream 185443 15999802 ~ 16004030 (-)
G99614 NA non-coding upstream 245837 16060196 ~ 16068129 (-)
AMCG00015666 NA other downstream 89223 15687642 ~ 15703290 (-)
G99454 NA other downstream 532029 15259461 ~ 15260484 (-)
AMCG00015660 NA other downstream 539792 15249901 ~ 15252721 (-)
AMCG00015659 NA other downstream 591722 15170615 ~ 15200791 (-)
G99426 NA other downstream 603119 15102617 ~ 15189394 (-)
G99605 NA other upstream 203224 16017583 ~ 16102456 (-)
G99646 NA other upstream 407406 16221765 ~ 16222155 (-)
AMCG00015681 NA other upstream 652940 16467299 ~ 16473177 (-)
AMCG00015691 NA other upstream 709755 16524114 ~ 16535468 (-)
AMCG00015694 NA other upstream 777869 16592228 ~ 16611444 (-)

Expression



Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000339_02555004_02620598 OSBP2 coding CI01000339 null 2555004 ~ 2620598 (-)