Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015706 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 17153275 ~ 17153478 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015706 | True | 204 | mRNA | 0.56 | 1 | 17153275 | 17153478 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015701 | gatb,LOC106602370,LOC106602377 | coding | upstream | 159994 | 16972365 ~ 16993281 (+) |
| AMCG00015700 | fbxw7 | coding | upstream | 282916 | 16835026 ~ 16870359 (+) |
| AMCG00015698 | NA | coding | upstream | 364766 | 16728102 ~ 16788509 (+) |
| AMCG00015699 | NA | coding | upstream | 442473 | 16679746 ~ 16710802 (+) |
| AMCG00015686 | NA | coding | upstream | 578089 | 16571651 ~ 16575186 (+) |
| AMCG00015705 | NA | coding | downstream | 33360 | 17186838 ~ 17235784 (+) |
| AMCG00015708 | NA | coding | downstream | 128201 | 17281679 ~ 17300446 (+) |
| AMCG00015707 | lrba,LOC106602365 | coding | downstream | 164815 | 17318293 ~ 17330594 (+) |
| AMCG00015710 | lrba | coding | downstream | 197804 | 17351282 ~ 17385325 (+) |
| AMCG00015709 | lrba,LOC107598261 | coding | downstream | 262897 | 17416375 ~ 17447661 (+) |
| G99842 | NA | non-coding | upstream | 82221 | 17070583 ~ 17071054 (+) |
| G99840 | NA | non-coding | upstream | 85685 | 17067161 ~ 17067590 (+) |
| G99839 | NA | non-coding | upstream | 120546 | 17032429 ~ 17032729 (+) |
| G99836 | NA | non-coding | upstream | 140234 | 17012662 ~ 17013041 (+) |
| G99833 | NA | non-coding | upstream | 146798 | 17005412 ~ 17006477 (+) |
| G99867 | NA | non-coding | downstream | 296606 | 17450084 ~ 17465514 (+) |
| G99915 | NA | non-coding | downstream | 447225 | 17600703 ~ 17600908 (+) |
| G99933 | NA | non-coding | downstream | 684139 | 17837617 ~ 17837900 (+) |
| G99934 | NA | non-coding | downstream | 779521 | 17932999 ~ 17933328 (+) |
| G99932 | NA | non-coding | downstream | 801007 | 17954485 ~ 17956630 (+) |
| AMCG00015703 | rps3a,LOC106592945 | other | upstream | 21500 | 17098459 ~ 17131775 (+) |
| AMCG00015687 | NA | other | upstream | 654744 | 16494692 ~ 16498531 (+) |
| AMCG00015682 | NA | other | upstream | 695433 | 16433443 ~ 16457842 (+) |
| G99624 | NA | other | upstream | 1021888 | 16131044 ~ 16131387 (+) |
| G99541 | NA | other | upstream | 1351641 | 15796950 ~ 15801634 (+) |
| G100007 | NA | other | downstream | 1166578 | 18320056 ~ 18325904 (+) |
| AMCG00015725 | smad1 | other | downstream | 1591409 | 18744887 ~ 18771966 (+) |
| G100338 | herc3 | other | downstream | 3113929 | 20267407 ~ 20268285 (+) |
| AMCG00015796 | hspa12b,LOC107583310,LOC107697252,LOC107721672 | other | downstream | 5525359 | 22678837 ~ 22683895 (+) |
| G101061 | NA | other | downstream | 7711611 | 24865089 ~ 24865552 (+) |
