G99839


Basic Information

Item Value
gene id G99839
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 17032429 ~ 17032729 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU124716
CGTGTCCATATGCCCATATATCATAAAGCCCCCTGTTACAAAGAAATTACTATTGAAACCTTCTTACTGTGCAGAGCCCCATGTTGTGGATAATAAGAGGTAAGACTGAGTACCTGAGCCCAgtgatttttaaacacaatcatGCATGTTTCAGGATCCACCCCATTCAGGGTCAGGGACTGCTTATCCCTGCTTCCACTGGCAACAACAGAAGCCATCATATTTGCGGGGTGTTGACTAGACCATAGTGGAGAATGGCGGGTTACATCTCTGTCTGGTCAAAAACAGTAGACACATCCAA

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU124716 True 301 lncRNA 0.45 1 17032429 17032729

Neighbor

gene id symbol gene type direction distance location
AMCG00015701 gatb,LOC106602370,LOC106602377 coding upstream 39148 16972365 ~ 16993281 (+)
AMCG00015700 fbxw7 coding upstream 162070 16835026 ~ 16870359 (+)
AMCG00015698 NA coding upstream 243920 16728102 ~ 16788509 (+)
AMCG00015699 NA coding upstream 321627 16679746 ~ 16710802 (+)
AMCG00015686 NA coding upstream 457243 16571651 ~ 16575186 (+)
AMCG00015706 NA coding downstream 120546 17153275 ~ 17153478 (+)
AMCG00015705 NA coding downstream 154109 17186838 ~ 17235784 (+)
AMCG00015708 NA coding downstream 248950 17281679 ~ 17300446 (+)
AMCG00015707 lrba,LOC106602365 coding downstream 285564 17318293 ~ 17330594 (+)
AMCG00015710 lrba coding downstream 318553 17351282 ~ 17385325 (+)
G99836 NA non-coding upstream 19388 17012662 ~ 17013041 (+)
G99833 NA non-coding upstream 25952 17005412 ~ 17006477 (+)
G99803 NA non-coding upstream 161309 16870620 ~ 16871120 (+)
G99780 NA non-coding upstream 380327 16650149 ~ 16652102 (+)
G99774 NA non-coding upstream 426450 16605756 ~ 16605979 (+)
G99840 NA non-coding downstream 34432 17067161 ~ 17067590 (+)
G99842 NA non-coding downstream 37854 17070583 ~ 17071054 (+)
G99867 NA non-coding downstream 417355 17450084 ~ 17465514 (+)
G99915 NA non-coding downstream 567974 17600703 ~ 17600908 (+)
G99933 NA non-coding downstream 804888 17837617 ~ 17837900 (+)
AMCG00015687 NA other upstream 533898 16494692 ~ 16498531 (+)
AMCG00015682 NA other upstream 574587 16433443 ~ 16457842 (+)
G99624 NA other upstream 901042 16131044 ~ 16131387 (+)
G99541 NA other upstream 1230795 15796950 ~ 15801634 (+)
G99475 NA other upstream 1718015 15314036 ~ 15314414 (+)
AMCG00015703 rps3a,LOC106592945 other downstream 65730 17098459 ~ 17131775 (+)
G100007 NA other downstream 1287327 18320056 ~ 18325904 (+)
AMCG00015725 smad1 other downstream 1712158 18744887 ~ 18771966 (+)
G100338 herc3 other downstream 3234678 20267407 ~ 20268285 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other downstream 5646108 22678837 ~ 22683895 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000298 fam160a1a coding NC_007112.7 CM002885.2 24469313 ~ 24514673 (+)