G99803


Basic Information

Item Value
gene id G99803
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 16870620 ~ 16871120 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU124678
acacacacacactacaaatatataaactgacaaaaatatatataaagaaacaaacaagtgtAAATTGCAAATAGATGCAGGTCAGTCTTAATGTTAAGAGTTTTAAACATGACAGTTTTCTTGCTGTGAACTGACTTGGCTTAACAGTTATGGTTTATGAATTGAAATGCACCACAggcaaaaaaaaacctaaattaatAGTCGCCAAATGATTTGCCTCATTCTCCAAGAGCCACACAACTCAAGCTGAACTGTGAAAGTGGTATaacactgtatattaaacaatcttattctttctctttctctttttttttttctgttaatttataGTCTGGTTTGAGAAATCAGATGatgcaggttttatttttcagttcgTGTAACTGCCTGACGTAACAGACAGAAAAACCTTAAAGGGATTGTGTCTATTGTTTGATTCACTtagaatttttattttcttataacttaagtgcaataaaatgtggttttttttttcatttcaag

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0031966 mitochondrial membrane cellular_component
GO:0005739 mitochondrion cellular_component
GO:0005740 mitochondrial envelope cellular_component

KEGG:

id description
ko00020 Citrate cycle (TCA cycle)
ko00620 Pyruvate metabolism
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05012 Parkinson disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU124678 True 501 lncRNA 0.31 1 16870620 16871120

Neighbor

gene id symbol gene type direction distance location
AMCG00015700 fbxw7 coding upstream 261 16835026 ~ 16870359 (+)
AMCG00015698 NA coding upstream 82111 16728102 ~ 16788509 (+)
AMCG00015699 NA coding upstream 159818 16679746 ~ 16710802 (+)
AMCG00015686 NA coding upstream 295434 16571651 ~ 16575186 (+)
AMCG00015692 NA coding upstream 301369 16568448 ~ 16569251 (+)
AMCG00015701 gatb,LOC106602370,LOC106602377 coding downstream 101245 16972365 ~ 16993281 (+)
AMCG00015706 NA coding downstream 282155 17153275 ~ 17153478 (+)
AMCG00015705 NA coding downstream 315718 17186838 ~ 17235784 (+)
AMCG00015708 NA coding downstream 410559 17281679 ~ 17300446 (+)
AMCG00015707 lrba,LOC106602365 coding downstream 447173 17318293 ~ 17330594 (+)
G99780 NA non-coding upstream 218518 16650149 ~ 16652102 (+)
G99774 NA non-coding upstream 264641 16605756 ~ 16605979 (+)
G99772 NA non-coding upstream 267673 16600201 ~ 16602947 (+)
G99771 NA non-coding upstream 271201 16598479 ~ 16599419 (+)
G99745 NA non-coding upstream 331239 16538237 ~ 16539381 (+)
G99833 NA non-coding downstream 134292 17005412 ~ 17006477 (+)
G99836 NA non-coding downstream 141542 17012662 ~ 17013041 (+)
G99839 NA non-coding downstream 161309 17032429 ~ 17032729 (+)
G99840 NA non-coding downstream 196041 17067161 ~ 17067590 (+)
G99842 NA non-coding downstream 199463 17070583 ~ 17071054 (+)
AMCG00015687 NA other upstream 372089 16494692 ~ 16498531 (+)
AMCG00015682 NA other upstream 412778 16433443 ~ 16457842 (+)
G99624 NA other upstream 739233 16131044 ~ 16131387 (+)
G99541 NA other upstream 1068986 15796950 ~ 15801634 (+)
G99475 NA other upstream 1556206 15314036 ~ 15314414 (+)
AMCG00015703 rps3a,LOC106592945 other downstream 227339 17098459 ~ 17131775 (+)
G100007 NA other downstream 1448936 18320056 ~ 18325904 (+)
AMCG00015725 smad1 other downstream 1873767 18744887 ~ 18771966 (+)
G100338 herc3 other downstream 3396287 20267407 ~ 20268285 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other downstream 5807717 22678837 ~ 22683895 (+)

Expression


Co-expression Network