G99772


Basic Information

Item Value
gene id G99772
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 16600201 ~ 16602947 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU124643
ATTGCTGAACTGAATATTTCCTTTGCAGAAATCATAAAGCCTTAACACAgaattgttaaatatttgccACACTTTTCACAAGGGAAAATTTAcagggttttaaaaaaaaagtttttttttgccatGATGTAGTGACACTATGATTTTATGGCTAGATGCAACAGTAAATATGTTAAAAACCATaagtaaacaatattttttcatcACAGAGAAAAATATTCTTTCATATTCTATTTCCACATAGGTTTTAGAGCTTTTTCTGTAGTTAACTTGCTTAAGTCTTTTGATTGGACCACTGACTTTTCAGAAAAGCTGCTGCCTTTGCTCGGGTCTCTCTTATGAGGCGGCATCTCACTGCCATTCCAGTTCTTGCTGGAGACTTTGACACTCTGCGCTCTCTTTAATGTGCCCTGGACGATATCCTCATCCTTTGGAGGGAACACACTGTTACTAGGGTTGGCTTTCACGGTTTGCTTCTTGGAGCCAGTTCTGGTTGGAGTGGCACTGTTAGAAGGCGATGAGGGGTATGAACTAGTGGTCAGGTCTTTTTTCATCCTCCTAGAGGAAGAGGCAACTGTTCCACGGGCAAAACTGGGAGTGCCAGACAAGGGCTTGCTGCTATGAGTGGGAGTCTGGCAGCTGCTCCCTTCAGCTGCTCCTTGTGCCTGAGCCAGGGCTCGCATAGTGGAACGGCACATCTTCTCCTCTGGCTTGGGCTTAGGAATGTTACGTACGGGTTTGGCACTGGGCTTCCTGATTGAGTGGGTGCGTGGGTTTTGTTCTCTAAGCCAATTGTTACTAGTACTGGATGGTGTGCCCTTGTGAACTTTTTGGTTCTCTGCAGGAACGTTAGAGCTTTGAGAGGTACTTGTGTGGTATTCAGTCTTTCTCCCTGGATTGCTCTGATCCTGGTGTGGATGCCtcagttctttatttttcttttcataggCTGATGACTCTGTTGTCTTTACAGAGTTGCCAGACCTGCTCTGTCTGGATATAGGCATCACTTTTCGCATTTTTTGATTTTCTGTGGCAGGTAATGTTCTTACACCATGGGCAGTTCCACTATTTCGAGTACCTGGTATTTTTGAAGATTGCTTCGATTTCCTAGGCCCAGTTTTTTTACTGTTGACCTGTAccattttctcatttttcttttgttttgttgtcccACAGCTATCACAAGCTTTCTCCTCTGTGGTGGCAGACTGAGTAACAGAAACCGACTCCTCATTAGTGGATTCTGATTCCAAATTAGAAGAAATTGAACTTGGGTCTTTGAGATTGTCCATACTAGTATGCACATTTTGGTTTCCAAAGTTATTGTCTTCCTTAAAAACAGGAAGGTTGTCATGGATTTGAGAGTAGTCCAAGGATGTAGAATGGTCAGTCTCTGTACAATCCATTATGTAAAGTATAGGTTTCTTGTTTGTTGCAGAGTCATCTAAAGGAAGATGTATATCACACGTTGAGGAAATAGTGCTAATGTCCCCTTCCTCTTCATTTTGAGAAGAGATTGtaaactgtaaagattccatTTTACAATCAGATTCTGTTCTGgaatcattttctgttttggagCTCTTAGAAGAGGGAGGGGTATCCATATCTAAAATTTCAGGACTTTTTAGGGTATCTTTTTCCATCTTCAAATTATCCAAACAAACATCTCCCTGGTTCACTAAGTacatactgttattattaataggaGTAATGAGACTGAATACCTGAAGTCCAGGGACCAACGTGTGCCTTGACACACTGACATTCATTTGCTCATGACTGGTACCGTTAgtcttttcaaaaacatttttgtagtggttattattatttatcccaCCACTTTCTGAAACAACAGTAGTATTGCCATTAATGACATGTGGATCTTCCATTATATTCAAACCAATTTTAAACTCAACCACAGGAGTTTGTGAAAAATCTTCCTGGTCTGCATTCAATGTGACACTGTCTTTCCTGTCTAAGTTGTGGCATTTCACACCAAGTTCCTGATTGTCATTTGGGGAATCCATCCATGGGTTGGTTTTCCTGGAGTGGCACCTAGAGATCCTGGGAAGGCTGTTAAACTTGGTGGAGTCCTCTGACCTCAAGCCCCCAAGGAAGCTGCAGAGCTCTCGGTCAGCCATGGCAGCCACTGAGTGCCTGGAGCGCTTTACACTGGAAGAGCGGGTCAGGGGGCTGTGGGGTTTGTGCTGAAAGAAGTCCAGGAGGCCCTCCTTGGTTAGCATCTCCACATCATTCTCACTGCTACTACGACCAAAACCCCTGCCTTGATCCCCACCTGCCCAAGAATGCCTCTTCTCCTCCAGTTCCCGAAGCCGCTTCTGCCTGGCAGCCTCCTTCAGGTCCCTCTCAAGATTATCCTGCAAGGCAAAAAGCACAGGGAAAagcaaaaagtaattttaagaGATATAACTGAGCTGGGTATCatgtaaagacatttaaaaatccaGTGGTTGACTGATATTCTGTGATAGAGATGTTTGTCATAGCATGTCTCTGTGTCAGCTTGAGAGCTCATATTCACCAACCAATTCTTAAACATAGTCTCTGATTCCATTCCAAGAGTAATCTCTGaccgtttttttttcttgtggtggaaaaaaacaaatcaattaaaactaaataccTGAAGTCTTCATTAGATAGAGTGGTGAGAGAAAGTTTGTAAACCCTTTATCTGTGTACCTGCATTAATTTGACCTACAATGTGATCTGATCATCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU124643 True 2747 lncRNA 0.42 1 16600201 16602947

Neighbor

gene id symbol gene type direction distance location
AMCG00015686 NA coding upstream 25015 16571651 ~ 16575186 (+)
AMCG00015692 NA coding upstream 30950 16568448 ~ 16569251 (+)
AMCG00015688 NA coding upstream 77320 16516896 ~ 16522881 (+)
AMCG00015689 NA coding upstream 87911 16509697 ~ 16512290 (+)
AMCG00015685 NA coding upstream 97418 16499697 ~ 16502783 (+)
AMCG00015699 NA coding downstream 76799 16679746 ~ 16710802 (+)
AMCG00015698 NA coding downstream 125155 16728102 ~ 16788509 (+)
AMCG00015700 fbxw7 coding downstream 232079 16835026 ~ 16870359 (+)
AMCG00015701 gatb,LOC106602370,LOC106602377 coding downstream 369418 16972365 ~ 16993281 (+)
AMCG00015706 NA coding downstream 550328 17153275 ~ 17153478 (+)
G99771 NA non-coding upstream 782 16598479 ~ 16599419 (+)
G99745 NA non-coding upstream 60820 16538237 ~ 16539381 (+)
G99742 NA non-coding upstream 63869 16536085 ~ 16536332 (+)
G99697 NA non-coding upstream 95783 16458860 ~ 16504418 (+)
G99662 NA non-coding upstream 304171 16295825 ~ 16296030 (+)
G99774 NA non-coding downstream 2809 16605756 ~ 16605979 (+)
G99780 NA non-coding downstream 47202 16650149 ~ 16652102 (+)
G99803 NA non-coding downstream 267673 16870620 ~ 16871120 (+)
G99833 NA non-coding downstream 402465 17005412 ~ 17006477 (+)
G99836 NA non-coding downstream 409715 17012662 ~ 17013041 (+)
AMCG00015687 NA other upstream 101670 16494692 ~ 16498531 (+)
AMCG00015682 NA other upstream 142359 16433443 ~ 16457842 (+)
G99624 NA other upstream 468814 16131044 ~ 16131387 (+)
G99541 NA other upstream 798567 15796950 ~ 15801634 (+)
G99475 NA other upstream 1285787 15314036 ~ 15314414 (+)
AMCG00015703 rps3a,LOC106592945 other downstream 495512 17098459 ~ 17131775 (+)
G100007 NA other downstream 1717109 18320056 ~ 18325904 (+)
AMCG00015725 smad1 other downstream 2141940 18744887 ~ 18771966 (+)
G100338 herc3 other downstream 3664460 20267407 ~ 20268285 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other downstream 6075890 22678837 ~ 22683895 (+)

Expression


Co-expression Network