XLOC_000298 (fam160a1a)


Basic Information

Item Value
gene id XLOC_000298
gene name fam160a1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 24469313 ~ 24514673 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000492
CAGCAAATCACGGATCTGATCTAGAGGTTGTGGGCGGGGCTTGTGCTCGAGCTCACCTTTCTAATGCACGCTCAGGTGACCGAGCGAGCGCTGTGCGGTGTCGTCAGAAATCTCTGGATCTTTAAAGTCTGTTCTGACAGAATCAACAAACCCACGACGACAACGACATTTGGACCACGGTAATGAGAGAAATAATGACGCGGGGGTATGATCGGTTTAACTCCAGTCGAAGAATATTATGACAGAGCTACACAGAGAGCTGCTGAACTGAAGTTTTGCCAGGTGTCGAAGAGAAACAGCGTTTGAAGACTAAAGGCAAAGACCCCCTTTGAATAGTTCTCAATCAACATGCCTCATTGAGCTCCGGAAAGCTCTGAAGATGCGAATGTTTCCAGCCTTGTGGAGTACTGTGTTCCCAGCAGCAGCTTTCAGCAGTGGTCTGACTGAGTATCTTATGTGACCATCCAGATAATCATTCTGGGTTGAAACTGGCTTCAACTCCATCCTTCAAAGTGAACATGATGGTTTAATATTGCTGTGAAGGTGCAACAATGACATCTATGGTTGTCAATGGGAACCGTGGTGGCCAGACACTGGTCCTGACAGGAGTGGATCCTGAAACATGCATGATTGTGTTCAAAAACCACTGGGCACAGGTGGTGAAGATTCTAGAGAAGCATGACCCTTTGCGCAGTAATACTGGTGGTCTGGGTGGAGGCCATGGTCTGGCTGGAGGTGGAGGACTCGGCAGCTTTCGTTTTGGACCAATCCCGGGTGATGAGGCCAGCGCTGTGCAGAACTATGTAGAACACATGCTCTTTCTCCTCATGGAGGAGGAATGTGGTCAAAATGGAGCCATGGGGCCCATCCTGGAGTTTGTAGTGATGGAGAATGTATTGGAGAGGCTATTCATCTGGAGCTTGAGACGAGAATTCACAGACGACATGAAATTAGAGCAGCTAAAGATGTATGAGATGCTGATCGGTCAAGCCAGGCAGCCATTGCTTCATCATAAACCTGTGTTGAAGCCCTTAATGATGCTTCTGTCATCCTGCTCCGGGTCTCCGACAGGTCCGAGCTCCCCCGCTGTGGAGACAGAACTCGTGCTGCTCCTGAACCAGCTGTGCTGTGTCCTGGCTAAAGATCCTTCAGTCCTGGAGCTGTTTTTCCATACCAGTGAGGACCAAGGAGCTGCTAACTTCCTCATCTTCTCCCTGCTCATCCCTTTCATACACAGGGAAGGATCAGTCGGACAGCAGgccagagatgctcttctacttATTATGGCTCTTTCTGCTGAAAATCATGTTGTAGCCAAACACATTGCAGAGAACACCTACTTCTGTCCGGTTTTGGCTACAGGTCTGAGCGGCCTTTATTCATCTTTGCCTACCAAGTTGGATGTACCCAGTGAAGAGTGGCACTGTCTGCACCGTGACGACTGGCAACAACTGCCTGCTCTTGTGCAGTTTCTTAACTCTCTGGAGTTCTGCAATGCCGTCATACAGGTGGCTCATCCTTCCATCAGAGACCAGCTGGTTGGCTACATCCACAATGGTTTTCTGGTACCTGTTCTAGCACCAGCATTGCACAAGCTGACACTTGAAGAGGTGATGACCACAACCGCATACCTGGACCTGTTTATACGCAGTGTTTCTGAACCTGCCTTGCTGCATACCTTCCTCAGCTTCATCTTGCTCCATCGCCATGACAGTGTGCACATTTTGGACACACTAGTCAGCCGCATCAACACTCCTTTTCAGCTGGGCACTGTATCTCTGGCTCTGTTTCGCACTCTCATCGGCTTATACTGTGAGGATGTCATGCTCCAGTTGATTTTCAAGTACCTGATCCCCTGTAACCACATGATGTTGAGTCAGCGTAGAGTCCTGAATGAGAGAGACTGTTACTCCGTGTCGGCCGCCAAGATTCTAGCCCTTACACCCTCTTGCTGCTCTCCCGAGATCATCCCCCCTCCTCTTAGACAGCTGGACTCAATCCTCTGGTCAAAAGGCACTGATGGCTCCCAAACTGGAACTATGGAAACAAAGGAGACCCTCTTAGCAGAGGATGACTGTGTAATTGGCTCAGAGATCTACCTGGATGTCAGTTACCTACACTATTTGTACGATGCTCGAAACAGCATTAGTCACTGTATGCGAGCATGCAGTGTGTGGTCTGCCCCTTACAATGGTGAGAACCCTCCTCCAGAGGAATACCAGCGCAGCACATTGGATGAAGCAAATAGAACTAGGTCATCAGTTGCCACcaggaaaaaaactaattcagtGTATAACTCTGGTCCACCCCTCAAAGACCTCTCTGCTACTCCTGGATTGCTGGATCTGGAGTGGGATGATAGTTATGATGCTTGTCCTGCACAAGTGCATACAGAAGAAGATCAGGAGACTCGccacatcccggacgagcccccagagCACATTCAAGAACTGAGGAGAACTGCTATTATGTTTGTGAAGGGCTCTTACATTGAAGAGTCTGAGTTTCAGAACGATGTTATGGTCTATAACCTTGTAGCTCAGAAGGACGCCAATGATTCTGGCAATAATTATCGTGATCCATCCAAACCTACTGAACCACAAAAACAGGAGGTCTTAGATGGACGAACAACTGATCAAAAAGCTAAAAATTCAGAATCCTCATTAAACAATGGGTTGAACTCCCCAGTTAATGAAATGGACAGTAAAAAGAGGGGGTCACAATCAGACCAAAAGCTACAAGGCCCAGAAGGGGAGGATCTTATGGCCCAGTATGAGGAACTGATTAGAACTCTAGGTGCACAGCCTAATAGTCCAACAAAAGCAGACAGTGAGCTCAAGAGTCGTGTTGACCTCATAGATGACGAGGAGGATGAAATGGACTTTAATTCATTCTCGCCAGAGACACCAGAAGCAGAAAAGTTGCCTTCTCCTTTTGGAACCAAACCTCGCAGTGGGAGCAAGGGTCATGCTGTGCCTTTTACAgGGCCGTTTGTGAGTGTACTGTTGTCTCGACTAGAAAACATGCCCAGTAACACTCTCCATGTGAACTTGCTTCTGACCGGCATCCTGGCTCAGTTAGCCGCTTACCCTCAACCCCTGCTGCGATCTTTCCTTCTCAACACAAACTTGGTGTTCCAGCCTAGTGTCCGCTCACTATACCAGGTTCTGGCCTCAGTGAAGAACCAGATAGATGTATGGTCATCAAAAAATAAAGACTCCTCTGAGCTCCTCACAGCCGCTCAGCACTGCCTACTGGCCAGAGAGAGTTCACTAAGAGATCCTCAAAGTTCACAAGCTGAAGATGCTTCTGAGGCCGACCGAATCAAGAGGAACTCCGCTATTCAACCCAAAACTGTGGTTCCCCTAAGCAAAACAGAGGTATACGCCACAGTTCTGTTCGCCGAATTCTTAAAAGAACTGGCAGCCATTGCACAAGAACACTCCATCCTCTCTCATCTTCCCACAGAGCAGTAG
>TCONS_00000493
GACCCCCTTTGAATAGTTCTCAATCAACATGCCTCATTGAGCTCCGGAAAGCTCTGAAGATGCGAATGTTTCCAGCCTTGTGGAGTACTGTGTTCCCAGCAGCAGCTTTCAGCAGTGGTCTGACTGAGATAATCATTCTGGGTTGAAACTGGCTTCAACTCCATCCTTCAAAGTGAACATGATGGTTTAATATTGCTGTGAAGGTGCAACAATGACATCTATGGTTGTCAATGGGAACCGTGGTGGCCAGACACTGGTCCTGACAGGAGTGGATCCTGAAACATGCATGATTGTGTTCAAAAACCACTGGGCACAGGTGGTGAAGATTCTAGAGAAGCATGACCCTTTGCGCAGTAATACTGGTGGTCTGGGTGGAGGCCATGGTCTGGCTGGAGGTGGAGGACTCGGCAGCTTTCGTTTTGGACCAATCCCGGGTGATGAGGCCAGCGCTGTGCAGAACTATGTAGAACACATGCTCTTTCTCCTCATGGAGGAGGAATGTGGTCAAAATGGAGCCATGGGGCCCATCCTGGAGTTTGTAGTGATGGAGAATGTATTGGAGAGGCTATTCATCTGGAGCTTGAGACGAGAATTCACAGACGACATGAAATTAGAGCAGCTAAAGATGTATGAGATGCTGATCGGTCAAGCCAGGCAGCCATTGCTTCATCATAAACCTGTGTTGAAGCCCTTAATGATGCTTCTGTCATCCTGCTCCGGGTCTCCGACAGGTCCGAGCTCCCCCGCTGTGGAGACAGAACTCGTGCTGCTCCTGAACCAGCTGTGCTGTGTCCTGGCTAAAGATCCTTCAGTCCTGGAGCTGTTTTTCCATACCAGTGAGGACCAAGGAGCTGCTAACTTCCTCATCTTCTCCCTGCTCATCCCTTTCATACACAGGGAAGGATCAGTCGGACAGCAGgccagagatgctcttctacttATTATGGCTCTTTCTGCTGAAAATCATGTTGTAGCCAAACACATTGCAGAGAACACCTACTTCTGTCCGGTTTTGGCTACAGGTCTGAGCGGCCTTTATTCATCTTTGCCTACCAAGTTGGATGTACCCAGTGAAGAGTGGCACTGTCTGCACCGTGACGACTGGCAACAACTGCCTGCTCTTGTGCAGTTTCTTAACTCTCTGGAGTTCTGCAATGCCGTCATACAGGTGGCTCATCCTTCCATCAGAGACCAGCTGGTTGGCTACATCCACAATGGTTTTCTGGTACCTGTTCTAGCACCAGCATTGCACAAGCTGACACTTGAAGAGGTGATGACCACAACCGCATACCTGGACCTGTTTATACGCAGTGTTTCTGAACCTGCCTTGCTGCATACCTTCCTCAGCTTCATCTTGCTCCATCGCCATGACAGTGTGCACATTTTGGACACACTAGTCAGCCGCATCAACACTCCTTTTCAGCTGGGCACTGTATCTCTGGCTCTGTTTCGCACTCTCATCGGCTTATACTGTGAGGATGTCATGCTCCAGTTGATTTTCAAGTACCTGATCCCCTGTAACCACATGATGTTGAGTCAGCGTAGAGTCCTGAATGAGAGAGACTGTTACTCCGTGTCGGCCGCCAAGATTCTAGCCCTTACACCCTCTTGCTGCTCTCCCGAGATCATCCCCCCTCCTCTTAGACAGCTGGACTCAATCCTCTGGTCAAAAGGCACTGATGGCTCCCAAACTGGAACTATGGAAACAAAGGAGACCCTCTTAGCAGAGGATGACTGTGTAATTGGCTCAGAGATCTACCTGGATGTCAGTTACCTACACTATTTGTACGATGCTCGAAACAGCATTAGTCACTGTATGCGAGCATGCAGTGTGTGGTCTGCCCCTTACAATGGTGAGAACCCTCCTCCAGAGGAATACCAGCGCAGCACATTGGATGAAGCAAATAGAACTAGGTCATCAGTTGCCACcaggaaaaaaactaattcagtGTATAACTCTGGTCCACCCCTCAAAGACCTCTCTGCTACTCCTGGATTGCTGGATCTGGAGTGGGATGATAGTTATGATGCTTGTCCTGCACAAGTGCATACAGAAGAAGATCAGGAGACTCGccacatcccggacgagcccccagagCACATTCAAGAACTGAGGAGAACTGCTATTATGTTTGTGAAGGGCTCTTACATTGAAGAGTCTGAGTTTCAGAACGATGTTATGGTCTATAACCTTGTAGCTCAGAAGGACGCCAATGATTCTGGCAATAATTATCGTGATCCATCCAAACCTACTGAACCACAAAAACAGGAGGTCTTAGATGGACGAACAACTGATCAAAAAGCTAAAAATTCAGAATCCTCATTAAACAATGGGTTGAACTCCCCAGTTAATGAAATGGACAGTAAAAAGAGGGGGTCACAATCAGACCAAAAGCTACAAGGCCCAGAAGGGGAGGATCTTATGGCCCAGTATGAGGAACTGATTAGAACTCTAGGTGCACAGCCTAATAGTCCAACAAAAGCAGACAGTGAGCTCAAGAGTCGTGTTGACCTCATAGATGACGAGGAGGATGAAATGGACTTTAATTCATTCTCGCCAGAGACACCAGAAGCAGAAAAGTTGCCTTCTCCTTTTGGAACCAAACCTCGCAGTGGGAGCAAGGGTCATGCTGTGCCTTTTACAgGGCCGTTTGTGAGTGTACTGTTGTCTCGACTAGAAAACATGCCCAGTAACACTCTCCATGTGAACTTGCTTCTGACCGGCATCCTGGCTCAGTTAGCCGCTTACCCTCAACCCCTGCTGCGATCTTTCCTTCTCAACACAAACTTGGTGTTCCAGCCTAGTGTCCGCTCACTATACCAGGTTCTGGCCTCAGTGAAGAACCAGATAGATGTATGGTCATCAAAAAATAAAGACTCCTCTGAGCTCCTCACAGCCGCTCAGCACTGCCTACTGGCCAGAGAGAGTTCACTAAGAGATCCTCAAAGTTCACAAGCTGAAGATGCTTCTGAGGCCGACCGAATCAAGAGGAACTCCGCTATTCAACCCAAAACTGTGGTTCCCCTAAGCAAAACAGAGGTATACGCCACAGTTCTGTTCGCCGAATTCTTAAAAGAACTGGCAGCCATTGCACAAGAACACTCCATCCTCTCTCATCTTCCCACAGAGCAGTAGTCTTCAATTGTGcttttaaatttattgttttatgttaccAGGAAACCTCAGAACTTTTGACATTTTGaatgaattttagtttttattgcaAGAACTATAGCCTCTAAATTAATTTGGGAATGTCTTGTTGTAAATAATTTTGAGGGAGTATCCTTTCGGCATTTGTTTGTCTGCTGTGTGAACAACATTGTCTTTAAATTTCCATCATTTTGGTTATTACTAATACCCATTGCAGCACAAATGATCACTCATATAATCATATATTTATACtggtgttttctttttaaaatagccatttttattgaaaaaaaaaaagtgcatttttattGCTTTTCAGAAAAACAGTCTCTATCTCCACTATATAGACTAAAATGCATGTTATCATTCCCAATCACTGCATGCCTCAGTCCGTTTACTATTTGTATACTGTTTGTATGGTCATATGATCAGGGCTTGACGAATGAACAGTATGTGATAGTCCAGAAGACCAGTCAGAGAGCGATTGTATTCCAAGCTATGCCTCTTTTCAAGGGCACTATCATATATCCGGTGCAATGAATCACAAGACgtgttttcagaccagcgcaaccctaattttcatgttttgcaccacattgtttaaatagcaaaatcattTTTGCCACTTTGTGGACACATTGGGTGTGCTGCTCTGTAAAGAAGGCATGTTGAGGTGCATTGttagcgcgttgctattttgaggaactgaaatggactgtgctggactttagacaagATTTTACCTGGTCAATAGCAAAaagcgcgttagttatgcgcctatgtagGTTCAAAGGTTTAAtatacaggatgtacagcaatacacaaatatctttacatatgaaaaataaattaaatattacaaacattatttttttacattctgtaaatataaaaccactgcctccatttgcataatgttgttattattattagcagtattatttattatatgcatacagttgaagtaagaattattagccaccatttgatttaaatatttcccaaatgatgtataaCAGGGCAatggaattttttacagtatgtttgataatatttttcttctagagaaagtcatttttttgctttattttggctagaaacaaaagctgttattaattttttaaacaccattttaaattattagtCTCTTTAACCTATAATTCagtcaataattctgacttcaactgtatttatatttgctttaataaaaatcagtttagttttgtccacctgtctggttttggtgacatctgcatcaccatatgaggcATAAACATAGGATATaaaactcagttttttgagcacaattcattgttgttgttcgtttatttgtttgttggaaactagaactgaatttaaaaatagttttgaaacaaatctttgcgcttgacaaacacaattaaatatgtaggctaatggatgtcttcagctgagtgcgtacaacaccgtttccttattcaCCAAAGTAAAAAAGTAGAGTCAAAAAGTAAAGAGTAAGAGAAAGTAAAGTTATTTTCGTACacatggtttgtttaactgtttttttgccTGTAAAGTGTTTGAACCCACATAGGCGCATACCTAACGCTCTCTGCCCTGGACAAAGtgacacaaatggatttgctatttaaacaatgtggcgcaaaatgtgaaaattagggttacactggtctaaaaatagcaacaaatcatgctaAACACATCTTGTGTCTTATTACACTGGGTGTATGGTAGGCCCCTTAGATTTTGTGCCTACATCTTTAAATATAGAGCCCCAAATCTTTGCGTTTCAATCCATCTACACTGAAAACAAACACGAGCAttaccaaacaaaaacagcatcTTCAGCATCTTTGACAAACAAAAATGGTGTGTTGGAAAGTGCTGGAGTCGTGTGCACGGCTGGTTGAACGTTAACaaaaataacagattttaaaacaaaaccacacTAGTGTAAACAGCTAAATCTCAATACCGAGCAATCACTGCTGCAGCACAAATCATTACTCAAACATCAGGAGTTGTTTACACAAGTGCGGTtttcttttaaatagttttttttgtatgaaaatgCTCTTCACTCAGACaggtgaagaaaaaaattacaatttcttTTTAAACACTATACAGCCTAAAACGCATACAGTAAAATCTGACCATTTATGCTCACTGGACATGTGcgtatttttgtatttgtgtttcgTATTTGTATTTGAACTACTAGTTACATATAGAGTATGGTTATGTTACGTATTTCATATTCAAACTGCCAGTTGCTCATGGTCATAAGCTCATTTCAGCATAGATGGACTGAAACAGATTACCAGCTTTCACAAACTAAAACAGGGTCTTTGGCATCTTCACCCACCAATTTTAAATATGATAGACTATCATTTTAGACCATAACAAAACGTaagcattttaaaacgaaaaacgCACTAGTGCAAAGAGCACCTCAGTATCACCTGCCGTTAAACAGAGCCATTTCAAGGTGACTTGTGGACTCAAGTGCTGGACAACAGGTAACTGAAACTAAAGGTAACTAACGAAGCATTAGATTATGGAGATTACATGGgattgtttacccaaaaatgaaaattctgtcatcgtttactcattctccacttgttttatttcttttgttaaacttaaaagaaaaaatatactaAAGCATGTTGGAAAAAACAGTCACCGACTTTTATACTTATATTTATACATGGCAATGGCTGTGTtgtttccccaacattcttcagactATCAACGAAAGAGATTTTACTCAGAAGTAAGAAACTGAGTtttcttttgctgcttgttcaaactaataacattgaaataacatctttcttaaggttttttttggacaacttaaggGTTTTATGTTTAGTTTGCTAATCAAACCTTTTcagttaacctaatcaatttgaggtgagacaacatgaaggatttatgTGGAACGCAGCATTTTTGTACAGTGTAGAACCTGAAATGGTGatgaagttttcatttttggctgatctTTCCCTTTAATAA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-090312-132 Orthologous to human FHIP1A (FHF complex subunit HOOK interacting protein 1A).

Ensembl:

ensembl_id ENSDARG00000061021

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000492 False 3476 mRNA 0.48 13 24469313 24511625
TCONS_00000493 True 6184 mRNA 0.41 12 24482406 24514673

Neighbor

gene id symbol gene type direction distance location
XLOC_000297 NA coding upstream 6008 24462460 ~ 24463305 (+)
XLOC_000296 qdprb2 coding upstream 77640 24387659 ~ 24391673 (+)
XLOC_000295 qdprb2 coding upstream 83334 24382651 ~ 24385979 (+)
XLOC_000294 zgc:171517 coding upstream 88780 24376394 ~ 24380533 (+)
XLOC_000293 pimr178 coding upstream 101901 24365582 ~ 24367412 (+)
XLOC_000299 dctpp1 coding downstream 42741 24557414 ~ 24558749 (+)
XLOC_000300 NA coding downstream 81653 24596326 ~ 24599988 (+)
XLOC_000301 BX005016.1 coding downstream 605416 25120089 ~ 25120205 (+)
XLOC_000302 mnd1 coding downstream 663433 25178106 ~ 25216235 (+)
XLOC_000303 tmem131l coding downstream 703504 25218177 ~ 25316149 (+)
XLOC_000292 NA non-coding upstream 105623 24361993 ~ 24363690 (+)
XLOC_000290 NA non-coding upstream 125579 24336980 ~ 24343734 (+)
XLOC_000289 NA non-coding upstream 325143 24126380 ~ 24144170 (+)
XLOC_000288 NA non-coding upstream 350246 24118367 ~ 24119067 (+)
XLOC_000304 NA non-coding downstream 925364 25440037 ~ 25442701 (+)
XLOC_000305 NA non-coding downstream 1035380 25550053 ~ 25553299 (+)
XLOC_000308 NA non-coding downstream 1204980 25719653 ~ 25721702 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G109753 NA non-coding CI01000019 null 3142704 ~ 3142932 (-)
grasscarp (Ctenopharyngodon idella) CI01000300_09725667_09740001 FAM160A1, FAM160A1A coding CI01000300 null 9724270 ~ 9742037 (+)
bowfin (Amia calva) G99839 NA non-coding CM030132.1 CM030132.1 17032429 ~ 17032729 (+)