XLOC_000295 (qdprb2)


Basic Information

Item Value
gene id XLOC_000295
gene name qdprb2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 24382651 ~ 24385979 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000489
TAACCATCAAAAGAGCACGCTTTAATAATAACACATACATTTATTCAAGCTGTCAATCAGTGATTTCTCATTTAATTCTCAAGTATTCACATTCTGATTGAATTTGAAGAATCATAAGAGAAGTTCCAGTTAAATATTCAGGTTATCATTTATGCATCTGTCCGATGGTCTTCTTCGGTCTTTCACTGTCATTTCGCCTCCTGTTAATCCTCCGCTGGTGTGCCGCACAGGTGTCCCTCATTAACACTCACACCAGCGGTCTATAAATATGAAACAGTAAGCACTTTCTGCAGTGTTGAAGACAATCTGTGTCAGAATCATGTTATCGTTTGGCATTCTCCTTACCTtAATGGTTCTGAATTCCAGTCTGGCCTTCAGCGAAGTAAAGAAAGTGATTGTTTATGGGGGAAATGGAGCACTGGGTTCAGAGAGTGTGCGCTACTTCAGAGCCAAAAACTGGTGGGTTGCCTCTATTGCTCATAGCATTAACGCAGAAGCCAGTGCAAATGTTAAAGTTAAGATGACTGAATCCTTCACTGAGCAAGCCAAACAGGTAACAGTGGGTGTTGGTAAGCTGTTGGGTGATGAGAAAGTTGATGCCATCTACTGCGTGGCTGGAGGTCAAGCAGAGGGCAATGCCAAAGCCAACTctctgTACAAGTATGCTGATCTGATGTGGAAGGAGAATGTGTGGACCTCCACCATTTGTACTCACCTAGCAACCAAATACCTGAGAGAGGGCGGGCTGCTCACACTGTCTGGGGCCAAAGTAGCACTGGGGCCAACAACAGAATCTGTTAGTTTTGGAATGGCAAAGGCATCTGTACATCAGCTGACCCAGAGTCTCAGTGGGCCAAACAGTGGTCTTCCACCGCGATCTGTTGCTCTAGCAATCCTTCCagTGACTTTGGATACCCCCACAAATAGGAGGATCATGCCTAATGCTGATGTCAGTTCCTGGACACCACTAAATCATGTAACTCAGCTGTTCTTTAAGTGGACTGTTGGAGAAAGCAGACCAGCTTCAGGCAGTCTTGTGGAGCTTGTTACCGCTAATGGCAGAACAGTGGCTACCCCTATTAAAAGCCCTTAGCATATTAATCAGCTGTCAGTCTCCCAATAAAGACTCTTTTTAAA
>TCONS_00000490
ATCATGTTATCGTTTGGCATTCTCCTTACCTGTAAGTCACATGCTTCAAACTCAGTTACAGTTCTGCACAAATTTACTTTAACACTAATTAAACATGCCAACACTAATTGAGTCCTTAGGATTTGTTTGAGACAtgcagtAATGGTTCTGAATTCCAGTCTGGCCTTCAGCGAAGTAAAGAAAGTGATTGTTTATGGGGGAAATGGAGCACTGGGTTCAGAGAGTGTGCGCTACTTCAGAGCCAAAAACTGGTGGGTTGCCTCTATTGCTCATAGCATTAACGCAGAAGCCAGTGCAAATGTTAAAGTTAAGATGACTGAATCCTTCACTGAGCAAGCCAAACAGGTAACAGTGGGTGTTGGTAAGCTGTTGGGTGATGAGAAAGTTGATGCCATCTACTGCGTGGCTGGAGGTCAAGCAGAGGGCAATGCCAAAGCCAACTctctgTACAAGTATGCTGATCTGATGTGGAAGGAGA

Function

GO:

id name namespace
GO:0006729 tetrahydrobiopterin biosynthetic process biological_process
GO:0006559 L-phenylalanine catabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004155 6,7-dihydropteridine reductase activity molecular_function
GO:0070402 NADPH binding molecular_function
GO:0070404 NADH binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070720-19 Predicted to enable 6,7-dihydropteridine reductase activity; NADH binding activity; and NADPH binding activity. Predicted to be involved in L-phenylalanine catabolic process and tetrahydrobiopterin biosynthetic process. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in phenylketonuria. Orthologous to human QDPR (quinoid dihydropteridine reductase).

Ensembl:

ensembl_id ENSDARG00000086859

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000489 False 1137 mRNA 0.45 8 24382651 24385979
TCONS_00000490 True 478 processed_transcript 0.44 5 24382967 24384697

Neighbor

gene id symbol gene type direction distance location
XLOC_000294 zgc:171517 coding upstream 2118 24376394 ~ 24380533 (+)
XLOC_000293 pimr178 coding upstream 15239 24365582 ~ 24367412 (+)
XLOC_000292 NA coding upstream 18961 24361993 ~ 24363690 (+)
XLOC_000291 rps3a coding upstream 22998 24355515 ~ 24359653 (+)
XLOC_000290 NA coding upstream 38917 24336980 ~ 24343734 (+)
XLOC_000296 qdprb2 coding downstream 1680 24387659 ~ 24391673 (+)
XLOC_000297 NA coding downstream 76481 24462460 ~ 24463305 (+)
XLOC_000298 fam160a1a coding downstream 83334 24469313 ~ 24514673 (+)
XLOC_000299 dctpp1 coding downstream 171435 24557414 ~ 24558749 (+)
XLOC_000300 NA coding downstream 210347 24596326 ~ 24599988 (+)
XLOC_000289 NA non-coding upstream 238481 24126380 ~ 24144170 (+)
XLOC_000288 NA non-coding upstream 263584 24118367 ~ 24119067 (+)
XLOC_000287 BX119984.1 non-coding upstream 268093 24114525 ~ 24114558 (+)
XLOC_000301 BX005016.1 non-coding downstream 734110 25120089 ~ 25120205 (+)
XLOC_000304 NA non-coding downstream 1054058 25440037 ~ 25442701 (+)
XLOC_000305 NA non-coding downstream 1164074 25550053 ~ 25553299 (+)

Expression


Co-expression Network