XLOC_000296 (qdprb2)


Basic Information

Item Value
gene id XLOC_000296
gene name qdprb2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 24387659 ~ 24391673 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000491
GTTCTTGAATAGGtgagaaaataataaacatacatttattcAAGCTGTCATTCAGTAATTTCTCATTCAATTCACAAGTATTCACATTCTGATTGAATTTAAACCATAATAAGAGAAGTTCCAGTTACATGTTCTGGTAGTTTATGCATCTGTCCGATGGTCTTCTCTGGTCTTTCACTGACTTCACCTGTTAATCCTCCACAGGTGTGGCGCACAGGTGTCTCTCAATAACACTCACACCAGCGGTCTATAAATATGAAACAGTAAGCTCTTTCTGCAGTGTTGAAGACAATCTGTGTCAGAATCATGTTTACTTTTGGTATTCTCCTTACCTtaattGTTCTGAATTCCAGTCTGGCCTTCAGCGAAGTAAAGAAAGTGATTGTTTATGGGGGAACTGGAGCACTGGGACTAGAGAGTGTACGTTATTTCAGAGCCCAAAATTGGTGGGTTGCCTCTATTGCTCATAGTGTCAACAAAGAAGCCAGTGCAAATGTTAAAGTAAAGATGACTGAATCCTTCACTGAGCAAGCCAAACAGGTAACAGTGGGTGTTGGTAAGCTGTTGGGTGATGAGAAAGTTGATGCCATCTACTGCGTGGCAGGAGGTCAAGCAGAGGGCAACGCTAAAGCCAACTctCTGTACAAGTATGCTGATCTGATGTGGAAGGAGAATGTGTGGACCTCCACCATTTGTACTCACCTAGCAACCAAATACCTGAGAGAGGGTGGGCTGCTCACGCTGTCAGGGGCCAAAGTAGCGCTGGGGCCAACAGCAGAATCTGTTAGTTTTGGAATGGCAAAGGCATCTGTACATCAGCTGACCCGGAGTCTCAGTGGGCCAAACAGTGGTCTTCCACCGCGATCTGTTGCTCTAGCAATCCTACCGGGAACATTAGATACACCTACAAATAGGAAGATCATGCCTAATGCTGATGTCAGTTCCTGGACCCCGCTTAATCATGTAACCCAGCTGTTCTTTAAGTGGACTGTTGGAGAAAGCAGACCACCTTCAGGTAGTCTTGTGGAGCTTGTTACCGCTAATGGCAGAACAGTGGCTACTCCTATTAAAAGCCCTTAGCATATTAATCAGCTGTCAGTCTCCCAATAAAGACTCTTTTAAACTT

Function

GO:

id name namespace
GO:0006729 tetrahydrobiopterin biosynthetic process biological_process
GO:0006559 L-phenylalanine catabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004155 6,7-dihydropteridine reductase activity molecular_function
GO:0070402 NADPH binding molecular_function
GO:0070404 NADH binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070720-19 Predicted to enable 6,7-dihydropteridine reductase activity; NADH binding activity; and NADPH binding activity. Predicted to be involved in L-phenylalanine catabolic process and tetrahydrobiopterin biosynthetic process. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in phenylketonuria. Orthologous to human QDPR (quinoid dihydropteridine reductase).

Ensembl:

ensembl_id ENSDARG00000090118

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000491 True 1126 mRNA 0.44 8 24387659 24391673

Neighbor

gene id symbol gene type direction distance location
XLOC_000295 qdprb2 coding upstream 1680 24382651 ~ 24385979 (+)
XLOC_000294 zgc:171517 coding upstream 7126 24376394 ~ 24380533 (+)
XLOC_000293 pimr178 coding upstream 20247 24365582 ~ 24367412 (+)
XLOC_000292 NA coding upstream 23969 24361993 ~ 24363690 (+)
XLOC_000291 rps3a coding upstream 28006 24355515 ~ 24359653 (+)
XLOC_000297 NA coding downstream 70787 24462460 ~ 24463305 (+)
XLOC_000298 fam160a1a coding downstream 77640 24469313 ~ 24514673 (+)
XLOC_000299 dctpp1 coding downstream 165741 24557414 ~ 24558749 (+)
XLOC_000300 NA coding downstream 204653 24596326 ~ 24599988 (+)
XLOC_000301 BX005016.1 coding downstream 728416 25120089 ~ 25120205 (+)
XLOC_000290 NA non-coding upstream 43925 24336980 ~ 24343734 (+)
XLOC_000289 NA non-coding upstream 243489 24126380 ~ 24144170 (+)
XLOC_000288 NA non-coding upstream 268592 24118367 ~ 24119067 (+)
XLOC_000287 BX119984.1 non-coding upstream 273101 24114525 ~ 24114558 (+)
XLOC_000304 NA non-coding downstream 1048364 25440037 ~ 25442701 (+)
XLOC_000305 NA non-coding downstream 1158380 25550053 ~ 25553299 (+)

Expression


Co-expression Network