XLOC_000294 (zgc:171517)


Basic Information

Item Value
gene id XLOC_000294
gene name zgc:171517
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 24376394 ~ 24380533 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000488
AGTGTTGTAGACAGTTTGTGTCAGAATCATGTTTACTTTTGGTATCTTCCTTACCTtaATGGTTCTGAATTACAGCCTGGCTTCCAGGGAAGTAAAGAAAGTGATTGTTTATGGGGGAAAAGGAGCACTGGGCACAGAGAGTGTGCGCTACTTCAGAGCCAAACATTGGTGGGTTGTATCTGTTGATGTCAGAGTCAACAAAGAAGCCAATGCAAATGTTAAAGTTAAGATGACTGAATCCTTCACTGATCAAGCCAAACAGGTAACAGTGGGTGTTGGTAAGCTGTTGGGTGTTGAGAAAGTTGATGCCATCTTCTGCGTGGCTGGAGGTCAAGCAGAGGGCAATGCTAAAGCCAAATCTCTGTACAAGTATGCGGATCTGATGTGGAAACAAAATGTGTGGACCTCCACTATTTGTACTCACCTAGCAACCAGATACCTGAGAGTGGGGGGACTGCTCACACTGACTGGAGCCAAAGTAGCACTGGGGCCGACAGCAGAATCTGTTAGTTTTGGAATGGCAAAGGCATCTGTACATCAGCTGACCCGGAGTCTCGGTGGGCCAAACAGTGGTCTTCCACCACGATCTGTTGCTCTAGCAATCCTTCCAGTAACTTTGGATACACCCACAAATAGAAAGATCATGCCCAATGCTGATGTCAGTTCCTGGACCCCGCTTAATCATGTAACCCAGCTGTTCTTTAAGTGGACTGTTGGTAAAAGCAGACCACCGTCAGGTAGTCTTGTGGAGCTTGTTACTACAAATGGCAAAACAGTAGCTACCCCTATTAAAAGCGTTTAACATATTAATCAGCTGTCAGTCTCCCAATAAAGACTGTTTTAAGTGAT

Function

GO:

id name namespace
GO:0006729 tetrahydrobiopterin biosynthetic process biological_process
GO:0006559 L-phenylalanine catabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004155 6,7-dihydropteridine reductase activity molecular_function
GO:0070402 NADPH binding molecular_function
GO:0070404 NADH binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080219-12 Predicted to enable 6,7-dihydropteridine reductase activity; NADH binding activity; and NADPH binding activity. Predicted to be involved in L-phenylalanine catabolic process and tetrahydrobiopterin biosynthetic process. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000090822

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000488 True 849 mRNA 0.45 8 24376394 24380533

Neighbor

gene id symbol gene type direction distance location
XLOC_000293 pimr178 coding upstream 8982 24365582 ~ 24367412 (+)
XLOC_000292 NA coding upstream 12704 24361993 ~ 24363690 (+)
XLOC_000291 rps3a coding upstream 16741 24355515 ~ 24359653 (+)
XLOC_000290 NA coding upstream 32660 24336980 ~ 24343734 (+)
XLOC_000289 NA coding upstream 232224 24126380 ~ 24144170 (+)
XLOC_000295 qdprb2 coding downstream 2118 24382651 ~ 24385979 (+)
XLOC_000296 qdprb2 coding downstream 7126 24387659 ~ 24391673 (+)
XLOC_000297 NA coding downstream 81927 24462460 ~ 24463305 (+)
XLOC_000298 fam160a1a coding downstream 88780 24469313 ~ 24514673 (+)
XLOC_000299 dctpp1 coding downstream 176881 24557414 ~ 24558749 (+)
XLOC_000288 NA non-coding upstream 257327 24118367 ~ 24119067 (+)
XLOC_000287 BX119984.1 non-coding upstream 261836 24114525 ~ 24114558 (+)
XLOC_000300 NA non-coding downstream 215793 24596326 ~ 24599988 (+)
XLOC_000301 BX005016.1 non-coding downstream 739556 25120089 ~ 25120205 (+)
XLOC_000304 NA non-coding downstream 1059504 25440037 ~ 25442701 (+)
XLOC_000305 NA non-coding downstream 1169520 25550053 ~ 25553299 (+)

Expression


Co-expression Network