Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00000488 |
| length | 849 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 8 |
| gene id | XLOC_000294 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 24376394 ~ 24380533 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006729 | tetrahydrobiopterin biosynthetic process | biological_process |
| GO:0006559 | L-phenylalanine catabolic process | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004155 | 6,7-dihydropteridine reductase activity | molecular_function |
| GO:0070402 | NADPH binding | molecular_function |
| GO:0070404 | NADH binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-080219-12 | Predicted to enable 6,7-dihydropteridine reductase activity; NADH binding activity; and NADPH binding activity. Predicted to be involved in L-phenylalanine catabolic process and tetrahydrobiopterin biosynthetic process. Predicted to be active in cytoplasm. |
| ensembl_id | ENSDART00000102542 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00002831 | lncRNA | upstream | 12704 | 24361993 ~ 24363690 (+) | True | XLOC_000292 |
| TCONS_00000484 | lncRNA | upstream | 18433 | 24355523 ~ 24357961 (+) | False | XLOC_000291 |
| TCONS_00000485 | lncRNA | upstream | 19522 | 24355542 ~ 24356872 (+) | True | XLOC_000291 |
| TCONS_00000481 | lncRNA | upstream | 32660 | 24337062 ~ 24343734 (+) | False | XLOC_000290 |
| TCONS_00003071 | lncRNA | downstream | 81927 | 24462460 ~ 24463305 (+) | True | XLOC_000297 |
| TCONS_00002833 | lncRNA | downstream | 215793 | 24596326 ~ 24599988 (+) | False | XLOC_000300 |
| TCONS_00002832 | lncRNA | downstream | 215793 | 24596326 ~ 24599988 (+) | False | XLOC_000300 |
| TCONS_00002834 | lncRNA | downstream | 216360 | 24596893 ~ 24599988 (+) | False | XLOC_000300 |
| TCONS_00002835 | lncRNA | downstream | 217143 | 24597676 ~ 24599665 (+) | True | XLOC_000300 |
| TCONS_00000486 | mRNA | upstream | 8982 | 24365582 ~ 24367412 (+) | False | XLOC_000293 |
| TCONS_00000487 | mRNA | upstream | 9338 | 24366110 ~ 24367056 (+) | True | XLOC_000293 |
| TCONS_00000483 | mRNA | upstream | 16741 | 24355515 ~ 24359653 (+) | False | XLOC_000291 |
| TCONS_00000479 | mRNA | upstream | 298295 | 24076243 ~ 24078099 (+) | True | XLOC_000286 |
| TCONS_00000476 | mRNA | upstream | 463606 | 23784905 ~ 23912788 (+) | False | XLOC_000284 |
| TCONS_00000489 | mRNA | downstream | 2118 | 24382651 ~ 24385979 (+) | False | XLOC_000295 |
| TCONS_00000491 | mRNA | downstream | 7126 | 24387659 ~ 24391673 (+) | True | XLOC_000296 |
| TCONS_00000492 | mRNA | downstream | 88780 | 24469313 ~ 24511625 (+) | False | XLOC_000298 |
| TCONS_00000493 | mRNA | downstream | 101873 | 24482406 ~ 24514673 (+) | True | XLOC_000298 |
| TCONS_00000494 | mRNA | downstream | 176881 | 24557414 ~ 24558749 (+) | True | XLOC_000299 |
| TCONS_00000480 | other | upstream | 261836 | 24114525 ~ 24114558 (+) | True | XLOC_000287 |
| TCONS_00000478 | other | upstream | 509429 | 23866878 ~ 23866965 (+) | True | XLOC_000285 |
| TCONS_00000472 | other | upstream | 625181 | 23751099 ~ 23751213 (+) | True | XLOC_000283 |
| TCONS_00000467 | other | upstream | 871291 | 23504334 ~ 23505103 (+) | False | XLOC_000281 |
| TCONS_00000457 | other | upstream | 1096692 | 23274922 ~ 23279702 (+) | True | XLOC_000276 |
| TCONS_00000490 | other | downstream | 2434 | 24382967 ~ 24384697 (+) | True | XLOC_000295 |
| TCONS_00000495 | other | downstream | 739556 | 25120089 ~ 25120205 (+) | True | XLOC_000301 |
| TCONS_00000518 | other | downstream | 1730852 | 26111385 ~ 26119624 (+) | True | XLOC_000317 |
| TCONS_00000557 | other | downstream | 3332816 | 27713349 ~ 27730980 (+) | False | XLOC_000329 |
| TCONS_00000565 | other | downstream | 3596837 | 27977370 ~ 28001937 (+) | False | XLOC_000332 |
