XLOC_000285 (dre-mir-218a-2)


Basic Information

Item Value
gene id XLOC_000285
gene name dre-mir-218a-2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 23866878 ~ 23866965 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000478
GCGGGGTTTTCCTTTGTGCTTGATCTAACCATGTGGTTGCAGACTCAGACTAATACATGGTTCTGTCAAGCACCATGGAAGGTCTTGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083023

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000478 True 88 miRNA 0.48 1 23866878 23866965

Neighbor

gene id symbol gene type direction distance location
XLOC_000283 CT573447.1 coding upstream 115665 23751099 ~ 23751213 (+)
XLOC_000282 ncapg coding upstream 293648 23559478 ~ 23573230 (+)
XLOC_000281 NA coding upstream 360360 23489111 ~ 23506518 (+)
XLOC_000280 chrna9 coding upstream 448941 23406403 ~ 23417937 (+)
XLOC_000279 rhoh coding upstream 467886 23398405 ~ 23398992 (+)
XLOC_000286 mab21l2 coding downstream 209278 24076243 ~ 24078099 (+)
XLOC_000287 BX119984.1 coding downstream 247560 24114525 ~ 24114558 (+)
XLOC_000288 NA coding downstream 251402 24118367 ~ 24119067 (+)
XLOC_000289 NA coding downstream 259415 24126380 ~ 24144170 (+)
XLOC_000290 NA coding downstream 470015 24336980 ~ 24343734 (+)
XLOC_000270 CR376846.1 non-coding upstream 1345552 22521212 ~ 22521326 (+)
XLOC_000269 NA non-coding upstream 1348124 22510734 ~ 22518754 (+)
XLOC_000263 NA non-coding upstream 2365394 21500645 ~ 21501484 (+)
XLOC_000292 NA non-coding downstream 495028 24361993 ~ 24363690 (+)

Expression


Co-expression Network