XLOC_000270 (CR376846.1)


Basic Information

Item Value
gene id XLOC_000270
gene name CR376846.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 22521212 ~ 22521326 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000444
CCAaggccatatcaccctgcagcccaagacaggctactcactaaagctaagcaggggtAACCCCGctaagtacctggatgggagtcTACATGGAAAAATTAGGTTGCTGTTAgga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000114954

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000444 True 115 rRNA 0.50 1 22521212 22521326

Neighbor

gene id symbol gene type direction distance location
XLOC_000269 NA coding upstream 2458 22510734 ~ 22518754 (+)
XLOC_000268 si:dkey-234d14.2 coding upstream 92359 22427135 ~ 22428853 (+)
XLOC_000267 dnah6 coding upstream 285791 22002649 ~ 22235421 (+)
XLOC_000266 kdm4c coding upstream 549299 21937201 ~ 21971913 (+)
XLOC_000265 pax5 coding upstream 705658 21725821 ~ 21815554 (+)
XLOC_000271 anxa5b coding downstream 133549 22654875 ~ 22665098 (+)
XLOC_000272 zmynd10 coding downstream 169930 22691256 ~ 22703383 (+)
XLOC_000273 BX908795.1 coding downstream 321609 22842935 ~ 22876174 (+)
XLOC_000274 si:dkey-92j12.5 coding downstream 640043 23161369 ~ 23240046 (+)
XLOC_000275 CR759875.1 coding downstream 740531 23261857 ~ 23292761 (+)
XLOC_000263 NA non-coding upstream 1019728 21500645 ~ 21501484 (+)
XLOC_000262 NA non-coding upstream 1179559 21331425 ~ 21341653 (+)
XLOC_000260 CR762427.1 non-coding upstream 1266730 21254353 ~ 21254482 (+)
XLOC_000256 NA non-coding upstream 2373663 20146405 ~ 20147549 (+)
XLOC_000281 NA non-coding downstream 967785 23489111 ~ 23506518 (+)
XLOC_000283 CT573447.1 non-coding downstream 1229773 23751099 ~ 23751213 (+)
XLOC_000285 dre-mir-218a-2 non-coding downstream 1345552 23866878 ~ 23866965 (+)
XLOC_000287 BX119984.1 non-coding downstream 1593199 24114525 ~ 24114558 (+)
XLOC_000288 NA non-coding downstream 1597041 24118367 ~ 24119067 (+)

Expression


Co-expression Network