XLOC_000263


Basic Information

Item Value
gene id XLOC_000263
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 21500645 ~ 21501484 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003066
TGGCTTTCAGGCAGAGGAAGAGGCTGCGATATTGGCACTGTGGCAGTGAAGCCGCTTGTGTTCAGCCATTGCAGTGACGCAGGAGATTGAGTCGTCTGTACTCACTGTGGCGATGCAGTAAGGCAGATTGTTTTTGCAGCCGGGACACAGCAGCTCACAGTCGGGCAGGCTGAAGCCGCAGTAGGGACAGGGTGAACTCTCCTCCTCCACCTCTGAAGTATCTGGACGACTGATGGAAGACAGAAAAAAGATCGATCTTGTTACGATACTCTGGTCTCATCAGCATTGAGGCAAAACTGAAGGCAGAGTTTCTTAACCCAGCACGATGACATTCAATGACCGCTGATGTGAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003066 True 352 lncRNA 0.52 2 21500645 21501484

Neighbor

gene id symbol gene type direction distance location
XLOC_000262 NA coding upstream 158992 21331425 ~ 21341653 (+)
XLOC_000261 med28 coding upstream 188049 21309386 ~ 21312596 (+)
XLOC_000260 CR762427.1 coding upstream 246163 21254353 ~ 21254482 (+)
XLOC_000259 CT583646.2 coding upstream 562133 20936711 ~ 20938512 (+)
XLOC_000258 spock3 coding upstream 794349 20635190 ~ 20706296 (+)
XLOC_000264 primpol coding downstream 61827 21563311 ~ 21573013 (+)
XLOC_000265 pax5 coding downstream 224337 21725821 ~ 21815554 (+)
XLOC_000266 kdm4c coding downstream 435717 21937201 ~ 21971913 (+)
XLOC_000267 dnah6 coding downstream 501165 22002649 ~ 22235421 (+)
XLOC_000268 si:dkey-234d14.2 coding downstream 925651 22427135 ~ 22428853 (+)
XLOC_000256 NA non-coding upstream 1353096 20146405 ~ 20147549 (+)
XLOC_000254 NA non-coding upstream 1471579 20026889 ~ 20029066 (+)
XLOC_000253 NA non-coding upstream 1472719 20023932 ~ 20027926 (+)
XLOC_000269 NA non-coding downstream 1009250 22510734 ~ 22518754 (+)
XLOC_000270 CR376846.1 non-coding downstream 1019728 22521212 ~ 22521326 (+)
XLOC_000281 NA non-coding downstream 1987627 23489111 ~ 23506518 (+)
XLOC_000283 CT573447.1 non-coding downstream 2249615 23751099 ~ 23751213 (+)
XLOC_000285 dre-mir-218a-2 non-coding downstream 2365394 23866878 ~ 23866965 (+)

Expression


Co-expression Network