XLOC_000282 (ncapg)


Basic Information

Item Value
gene id XLOC_000282
gene name ncapg
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 23559478 ~ 23573230 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000469
GTGGCGCTTTCGTCGTTTTTCAACAGAGAAGTTTTCCAAGCCTTTTATGCAGtAATAACATCATGCCTGGAGACGCGGATCTGCAGATTGAAGAGGCTTTTCGGCGTGCACAGAAAGCTCATAACAATAAGGCCAAACTTGTTGCAAGTTTAAAGAACGGATATAATAAGCTGGAAGACAAAACCCAATTCCATGAGGAGTTTATACGTTGCCTGAAGTATGCCATGATTATTTACACTCGAGAGCCAGCAGTAGAGAATGTCATTGATTTTGTCTCAAAGTTTGCTGCAAGTTTTGAAATCCCCGTTAATGAGGAggctgaggaagaggaggaagaagaagaggacAATGAGTTTTTGAACTTTTTGTTCAATTTCCTTTTGGAGTCTCATGGTGCAAACAGCCATGCCGTGCGATTTCGAGTTTGTCAGCTGGTGAATAAATTGCTGGGCAGTCTGAGTGAAAACGCTCAGATCGACGATGATCTGTGTGATAGGATCCATGAGGCCATGCTGGTCAGAGTCACAGACAAATACCCTAATGTCAGAATTCAGGCAGCACTGGCCATGGCCAGACTCCAGGACCCCACTAATTCGGATTGCCCAACTATTAAAGCTTATGTTCTGCTTTTGGAAAATGACTCAAACCCTGAGGTTCGTCGTGCTGTGCTGTCCTGCATTGCACCTTCCGCCGTCACACTTCCTAAAATCTATAAGCGCACAAGGGACGTCAAGGAGAAAGTCAGGAAACTTGCTTATGAgGTACTTGCAGAGAAAGTGCATATTCGAGCTTTGACAATTGCTCAGAGAGTAAGTCTGTTACATGAAGGCCTCAGTGACTCTTCAGATTCAGTGAAGGAGGTTGTCAGGGCCCATTTGCTGCCTGCTTGGCTTCGCTTGCTCCAAGGAGATGTTTTGCAGTTGCTTCACAGACTAGATGTAGAGAACTGTGCAGACACTGCAGTGACTGCCTTGCATGCCATCTTTTCAATGGCAACAAGCCCTGATGACCTTATGCAAAATGGTGTCAGGTTGGATGAAAGGAAACTGATTCCTGTCAACTCCCTCACATGTGAAAATGTGTTGTACTGGAGAGCACTGTGTGAATTTGTCAAGAGTAAGGGAAATGAGGGTGAAGAATTACTGGAGCAGTTACTCCCCGAGGCAGCAATCTATGCTGAGTATCTATACAGTTTTCTAAAGAGCATTACTCAGCTGTCTGAGGCGCAAAGAGCTGATATGACACAGCTTGAGATGGTGATGACCCAAGAGTTTGTTGGGCAGCAGTTGATTCTGCTTGTTGGATGTCTGGACACTTCCGAGGAAGGCGGCAGGAAGCGCATGGTAGCAGTGCTGCAGGAGATACTTGTGATGCCCAACACACCTGTTTCTCTGATTGGTCTGCTAGTGGAGAAACTTGTCAACATTTTGCGAGATGATGCCCAGAAAATTCAGATGGTTGCTGAAATAATCTCTGATGTGAGGGAGCCTATTTTCCCCATCTCTGAGCCAGTGGATGAGAATGAGAAACGCAGAAAACAAGTCAGACTGGCTGAGGTGCGAGTACAGATAATGGAGGCCAAACAGACTCTAGAAGACTGCATCAGCTGTCAGGACTTTAGCCGTGCAGCTGAGCTAAAAGACTCCATCTCTCAACTGGAGGAGCTCAAGAACCAGCTTACCCTGGAGGTTTCACAGCCAGCTGAAAATGTCAAGGAACAGCGTATAGAGAAGAGTGATCCTGAGACCTTGTTGAAATGTCTGACAATGTGTGCCGAGTTGTTCAAGCAAATGAGCATAAAGAGAGGAGTCTGCCCTACCATGATTGCTCTAATAGAATCATTGATACTGCCAAGTGTTTCCAACCCTAATCCTGCTGTGCGCAACATGGCTGTCATATGTTTGGGAACTGCTGCTCTCCACAGTAAAGACCTTGCCAACACACACCTTGTGCTGCTCTTGcagatcacACAGCTGGATGAGCCTAAAATCAGAATCAGCGCCCTTCGATCTCTTATTGACCAGCTCCTGCTCAATGGTCTTGATATTCTACAAGACAAGCCTGTTCCTCCTACCTCCCAGACACCCGACTCTCCAGACATCAGTGACCGACAACCAGAAAAACAAGCAGAGGAGGAGAGCCCTGTGCAGAGCATTCTGAAGATGCTCTCAGAATTCCTTGATAGTGAGGTCTGCGAGCTTCGCACAGAGACAGCAGAGGGTCTGGCCAAGCTGATGTATTGTGGAAGAATCTTAAGCCCAAAGCTGTTGTCCCGCCTGGTGTTACTGTGGTACAATCCTGTAACCGAGGATGACCAAAGACTGCGCCATTGTCTGGGAGTTTTCTTACAACTGTATGCTCGAGCAAGCAGAGCAAATCAAGAGTGTGTGGAGGAGAGTTTACTACCAACCATGAGAACACTGTTCAATGCTCCTGTGACCTCTCCGTTGTCTGAGGTAGACGCGTCCAATGTGGCTGAATTGTTTGTTGAACTAACACGACCCAGTGCTCTCGTGCAACCTGCGGTCGTACAGGCTGTGTCAGTTCATGATTCGCTGGCGTTGCGTGTTTGTAATGAGATCTTGAGAGATGTTTCTGCTCCTGAAGTGCGCCTCTACTGCAAAACTCTCAGCTGGCTGGAGATTAACATTGAACCTGGACCTGCCAACAATGAACTGCAGCTCCTGTTAAAAGACATATTACAGGAAGTGAAAGATAAGTACTGCACAAGGGTTATTGAAAAGCTTTGCAACCAGCTAATCGGAGATCATGGTTCCAAATCAGCCAGTAACCAGGACACAGCTTTGCTTAACTTGGATGAAAACAATGGAGAGTTGATGAACAAAGATGAGACGAAACCTAAACGAGCAAAAAGAGGCCAGAAAAAAGCTGCCACTGCAAAGAATGGAAAAAAATCTTATAAAGCAGACATGTCTTCTGATGAAAGtgatgaAGAGAATATTCCTGAAGAGGTTCCATCAGTGCGACCAAGCCGACGTGCAAAAATTGCTGCTCTGGATAAAACCAAGCAGGATCTGACTGCCCTCATAAACCAGGAGGCCAATGGTTCATAAGAGTGGATTATTTGAGAGGGGCGTCTTTCAACCAATGATGTCCTCAGTTTTACCTGAGAAACTACTGGTGGATTTGAATACTAGCGTTCTCTCTCTTTAGTTTAAATACTGGTAAATATTGATGTATTCTAAGATTGTTGGTTAAAATGTGCCATCTGCAGTCCTTTTCATGTGTGTAGGAGGCATGCCAATTCATTTGCTTGTTTGAACCTGTAAACAAATGCACAAGGAAGTGGACTAAACTCACCCCCTTTTAAAATTGGCTATTTTAAGAATGTTGGTCTGATTATGTGAATGTTCATacctttatataattaatatgtgAGAGCTGATAAAGAAGCTAACTCCTGTTTCAATTGAACTTTTGTATgcttttaactgaaataaaacaaaatctgttcACAA
>TCONS_00000470
ATTCgctctgaaatcacatgtaaatatgacttcaaaacaacattaacactatttgattgactgaacaatgttttaCTTAACGTTAGAGAGTCATTGGCTGCTTACCTGATTTACCTGTATTtataatttgcaaagaatacttttctgaaatgatattattaaggagaaagtctaaaTGTGTGGATATAAAATCAATTGTACCCTAATGATATATTGCTgatgtatttgtttttgtgtgttagtAATAACATCATGCCTGGAGACGCGGATCTGCAGATTGAAGAGGCTTTTCGGCGTGCACAGAAAGCTCATAACAATAAGGCCAAACTTGTTGCAAGTTTAAAGAACGGATATAATAAGCTGGAAGACAAAACCCAATTCCATGAGGAGTTTATACGTTGCCTGAAGTATGCCATGATTATTTACACTCGAGAGCCAGCAGTAGAGAATGTCATTGATTTTGTCTCAAAGTTTGCTGCAAGTTTTGAAATCCCCGTTAATGAGGAggctgaggaagaggaggaagaagaagaggacAATGAGTTTTTGAACTTTTTGTTCAATTTCCTTTTGGAGTCTCATGGTGCAAACAGCCATGCCGTGCGATTTCGAGTTTGTCAGCTGGTGAATAAATTGCTGGGCAGTCTGAGTGAAAACGCTCAGATCGACGATGATCTGTGTGATAGGATCCATGAGGCCATGCTGGTCAGAGTCACAGACAAATACCCTAATGTCAGAATTCAGGCAGCACTGGCCATGGCCAGACTCCAGGACCCCACTAATTCGGATTGCCCAACTATTAAAGCTTATGTTCTGCTTTTGGAAAATGACTCAAACCCTGAGGTTCGTCGTGCTGTGCTGTCCTGCATTGCACCTTCCGCCGTCACACTTCCTAAAATCTATAAGCGCACAAGGGACGTCAAGGAGAAAGTCAGGAAACTTGCTTATGAgGTACTTGCAGAGAAAGTGCATATTCGAGCTTTGACAATTGCTCAGAGAGTAAGTCTGTTACATGAAGGCCTCAGTGACTCTTCAGATTCAGTGAAGGAGGTTGTCAGGGCCCATTTGCTGCCTGCTTGGCTTCGCTTGCTCCAAGGAGATGTTTTGCAGTTGCTTCACAGACTAGATGTAGAGAACTGTGCAGACACTGCAGTGACTGCCTTGCATGCCATCTTTTCAATGGCAACAAGCCCTGATGACCTTATGCAAAATGGTGTCAGGTTGGATGAAAGGAAACTGATTCCTGTCAACTCCCTCACATGTGAAAATGTGTTGTACTGGAGAGCACTGTGTGAATTTGTCAAGAGTAAGGGAAATGAGGGTGAAGAATTACTGGAGCAGTTACTCCCCGAGGCAGCAATCTATGCTGAGTATCTATACAGTTTTCTAAAGAGCATTACTCAGCTGTCTGAGGCGCAAAGAGCTGATATGACACAGCTTGAGATGGTGATGACCCAAGAGTTTGTTGGGCAGCAGTTGATTCTGCTTGTTGGATGTCTGGACACTTCCGAGGAAGGCGGCAGGAAGCGCATGGTAGCAGTGCTGCAGGAGATACTTGTGATGCCCAACACACCTGTTTCTCTGATTGGTCTGCTAGTGGAGAAACTTGTCAACATTTTGCGAGATGATGCCCAGAAAATTCAGATGGTTGCTGAAATAATCTCTGATGTGAGGGAGCCTATTTTCCCCATCTCTGAGCCAGTGGATGAGAATGAGAAACGCAGAAAACAAGTCAGACTGGCTGAGGTGCGAGTACAGATAATGGAGGCCAAACAGACTCTAGAAGACTGCATCAGCTGTCAGGACTTTAGCCGTGCAGCTGAGCTAAAAGACTCCATCTCTCAACTGGAGGAGCTCAAGAACCAGCTTACCCTGGAGGTTTCACAGCCAGCTGAAAATGTCAAGGAACAGCGTATAGAGAAGAGTGATCCTGAGACCTTGTTGAAATGTCTGACAATGTGTGCCGAGTTGTTCAAGCAAATGAGCATAAAGAGAGGAGTCTGCCCTACCATGATTGCTCTAATAGAATCATTGATACTGCCAAGTGTTTCCAACCCTAATCCTGCTGTGCGCAACATGGCTGTCATATGTTTGGGAACTGCTGCTCTCCACAGTAAAGACCTTGCCAACACACACCTTGTGCTGCTCTTGcagatcacACAGCTGGATGAGCCTAAAATCAGAATCAGCGCCCTTCGATCTCTTATTGACCAGCTCCTGCTCAATGGTCTTGATATTCTACAAGACAAGCCTGTTCCTCCTACCTCCCAGACACCCGACTCTCCAGACATCAGTGACCGACAACCAGAAAAACAAGCAGAGGAGGAGAGCCCTGTGCAGAGCATTCTGAAGATGCTCTCAGAATTCCTTGATAGTGAGGTCTGCGAGCTTCGCACAGAGACAGCAGAGGGTCTGGCCAAGCTGATGTATTGTGGAAGAATCTTAAGCCCAAAGCTGTTGTCCCGCCTGGTGTTACTGTGGTACAATCCTGTAACCGAGGATGACCAAAGACTGCGCCATTGTCTGGGAGTTTTCTTACAACTGTATGCTCGAGCAAGCAGAGCAAATCAAGAGTGTGTGGAGGAGAGTTTACTACCAACCATGAGAACACTGTTCAATGCTCCTGTGACCTCTCCGTTGTCTGAGGTAGACGCGTCCAATGTGGCTGAATTGTTTGTTGAACTAACACGACCCAGTGCTCTCGTGCAACCTGCGGTCGTACAGGCTGTGTCAGTTCATGATTCGCTGGCGTTGCGTGTTTGTAATGAGATCTTGAGAGATGTTTCTGCTCCTGAAGTGCGCCTCTACTGCAAAACTCTCAGCTGGCTGGAGATTAACATTGAACCTGGACCTGCCAACAATGAACTGCAGCTCCTGTTAAAAGACATATTACAGGAAGTGAAAGATAAGTACTGCACAAGGGTTATTGAAAAGCTTTGCAACCAGCTAATCGGAGATCATGGTTCCAAATCAGCCAGTAACCAGGACACAGCTTTGCTTAACTTGGATGAAAACAATGGAGGCCAGAAAAAAGCTGCCACTGCAAAGAATGGAAAAAAATCTTATAAAGCAGACATGTCTTCTGATGAAAGtgatgaAGAGAATATTCCTGAAGAGGTTCCATCAGTGCGACCAAGCCGACGTGCAAAAATTGCTGCTCTGGATAAAACCAAGCAGGATCTGACTGCCCTCATAAACCAGGAGGCCAATGGTTCATAA
>TCONS_00000471
GTTGCTGAAATAATCTCTGATGTGAGGGAGCCTATTTTCCCCATCTCTGAGCCAGTGGATGAGAATGAGAAACGCAGAAAACAAGTCAGACTGGCTGAGGTGCGAGTACAGATAATGGAGGCCAAACAGACTCTAGAAGACTGCATCAGCTGTCAGGACTTTAGCCGTGCAGCTGAGCTAAAAGACTCCATCTCTCAACTGGAGGAGCTCAAGAACCAGCTTACCCTGGAGATTAACATTGAACCTGGACCTGCCAACAATGAACTGCAGCTCCTGTTAAAAGACATATTACAGGAAGTGAAAGATAAGTACTGCACAAGGGTTATTGAAAAGCTTTGCAACCAGCTAATCGGAGATCATGGTTCCAAATCAGCCAGTAACCAGGACACAGCTTTGCTTAACTTGGATGAAAACAATGGAGAGTTGATGAACAAAGATGAGACGAAACCTAAACGAGCAAAAAGAGGCCAGAAAAAAGCTGCCACTGCAAAGAATGGAAAAAAATCTTATAAAGCAGACATGTCTTCTGATGAAAG

Function

symbol description
ncapg Acts upstream of or within mitotic sister chromatid segregation. Located in condensed chromosome and cytoplasm. Is expressed in nervous system; optic cup; and pharyngeal arch 3-7 skeleton. Orthologous to human NCAPG (non-SMC condensin I complex subunit G).

GO:

id name namespace
GO:0000070 mitotic sister chromatid segregation biological_process
GO:0007076 mitotic chromosome condensation biological_process
GO:0000793 condensed chromosome cellular_component
GO:0000796 condensin complex cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-041111-282 Acts upstream of or within mitotic sister chromatid segregation. Located in condensed chromosome and cytoplasm. Is expressed in nervous system; optic cup; and pharyngeal arch 3-7 skeleton. Orthologous to human NCAPG (non-SMC condensin I complex subunit G).

Ensembl:

ensembl_id ENSDARG00000070109

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000469 False 3479 mRNA 0.45 22 23559478 23573230
TCONS_00000470 False 3219 mRNA 0.45 20 23560216 23572825
TCONS_00000471 True 536 mRNA 0.44 6 23563691 23572574

Neighbor

gene id symbol gene type direction distance location
XLOC_000281 NA coding upstream 52960 23489111 ~ 23506518 (+)
XLOC_000280 chrna9 coding upstream 141541 23406403 ~ 23417937 (+)
XLOC_000279 rhoh coding upstream 160486 23398405 ~ 23398992 (+)
XLOC_000278 n4bp2 coding upstream 163024 23372470 ~ 23396454 (+)
XLOC_000277 ube2kb coding upstream 236509 23311617 ~ 23322969 (+)
XLOC_000283 CT573447.1 coding downstream 177869 23751099 ~ 23751213 (+)
XLOC_000284 slit2 coding downstream 210119 23783349 ~ 23912788 (+)
XLOC_000285 dre-mir-218a-2 coding downstream 293648 23866878 ~ 23866965 (+)
XLOC_000286 mab21l2 coding downstream 503013 24076243 ~ 24078099 (+)
XLOC_000287 BX119984.1 coding downstream 541295 24114525 ~ 24114558 (+)
XLOC_000270 CR376846.1 non-coding upstream 1038152 22521212 ~ 22521326 (+)
XLOC_000269 NA non-coding upstream 1040724 22510734 ~ 22518754 (+)
XLOC_000263 NA non-coding upstream 2057994 21500645 ~ 21501484 (+)
XLOC_000262 NA non-coding upstream 2217825 21331425 ~ 21341653 (+)
XLOC_000288 NA non-coding downstream 545137 24118367 ~ 24119067 (+)
XLOC_000289 NA non-coding downstream 553150 24126380 ~ 24144170 (+)

Expression


Co-expression Network