XLOC_000292


Basic Information

Item Value
gene id XLOC_000292
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 24361993 ~ 24363690 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00002831
CGCTTCGTGACGTCAATTTTAGAACCCTCGTTCTAGAATGCATATGCTGTAGGTCACCTCCAGCTTCCATCAGTTGGTGTACAGTAGTCGAGCAGTAGTGATTGCAGATTTATTATTGTCGATTATCTAGCGATTGATTAAACGATGAGGCTTTTTAGACATTATCGAGTACATCCAATGGTAGAGGTGCAGGAACCCCATTCCACTGCACCTGCACCACCCAACCCTGGCATTGATATGGAGGTCCAGGATGATCGTCCAGAAAATCCTGTTGAAACTCCTGTTGCCGGCGAGGGAACGAAGAGAAAATTGTGGAAAGTTGGATCTTTGTTTAAATGTCCTAAAGGACATGCAAAGAGCACCTCGGGTCACCAGCAACAACTGAACACTCGTCCAAGTGATGAGGCTCCCGTTGAAGCTGGTGAGGAAAACAAGGAAATAGAGAAAGTGGAGGAGAAGAATAGGAAGAAATGGTGGAGAAAATTCTTCAGATTTCAGAAAAGCAGCTCAAAGCGAGAGCAGCAGAAGAGTGAAGCCCATGAACCCGAAGAAGACAAGAAGGAAGCTCTTACCCTTGAAGAGCAAGAGAATGAAAAACTGAGGACAGCAGTATCCAGTGATGGTAAGTGACATGATCATGTCAGAAAGCATCATTTATACCCACATTTCAATTTCAGTTCAGTGATTTAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00002831 True 690 lncRNA 0.44 2 24361993 24363690

Neighbor

gene id symbol gene type direction distance location
XLOC_000291 rps3a coding upstream 2340 24355515 ~ 24359653 (+)
XLOC_000290 NA coding upstream 18259 24336980 ~ 24343734 (+)
XLOC_000289 NA coding upstream 217823 24126380 ~ 24144170 (+)
XLOC_000288 NA coding upstream 242926 24118367 ~ 24119067 (+)
XLOC_000287 BX119984.1 coding upstream 247435 24114525 ~ 24114558 (+)
XLOC_000293 pimr178 coding downstream 1892 24365582 ~ 24367412 (+)
XLOC_000294 zgc:171517 coding downstream 12704 24376394 ~ 24380533 (+)
XLOC_000295 qdprb2 coding downstream 18961 24382651 ~ 24385979 (+)
XLOC_000296 qdprb2 coding downstream 23969 24387659 ~ 24391673 (+)
XLOC_000297 NA coding downstream 98770 24462460 ~ 24463305 (+)
XLOC_000285 dre-mir-218a-2 non-coding upstream 495028 23866878 ~ 23866965 (+)
XLOC_000300 NA non-coding downstream 232636 24596326 ~ 24599988 (+)
XLOC_000301 BX005016.1 non-coding downstream 756399 25120089 ~ 25120205 (+)
XLOC_000304 NA non-coding downstream 1076347 25440037 ~ 25442701 (+)
XLOC_000305 NA non-coding downstream 1186363 25550053 ~ 25553299 (+)

Expression


Co-expression Network