AMCG00016867


Basic Information

Item Value
gene id AMCG00016867
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 32863246 ~ 32871525 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016867
ATGGCAACTGCCCAGAGCCTCGGAGGGACCATGGCTGACAGTCCACTGGAACCCTCCAGCCCAACTCGCCTGCCCTGGCTGGTGGGAGGCTCTCAGGTGGTggggctggcctgtgtggtgaTCACTGGGGTGTGGATGGGTCACTACAGGGGGGGCTACGCCTGGGACGGCTCCAGCAAGCAGTTCAACGTCCACCCACTGTGTATGGTCATCGGGCTGGTGTTCCTGTACGGAGATGccaTCCTGGTGTATCGTGTCTTCAGGAATGAGTCAAAGCGTGTGGCCAAAATACTGCATGGCATCATCCACCTCATCTCCCTGATTATCAGTATTGTCGGTTTCGTCTCTGTGTTTGGATTCCATGCAAAAGCCAACATCCCAGATATGTACTCTCTGCACAGCTGGTGTGGAATGCTTACTTTCGTTGTGTTTTGTATACAGTGGCTGATGGGCCTGACCATCTTCCTGTTCCCTGGGGCGTCGCCGGCCCTGCGCAGCTGGTACCTGTCCCTGCACGTCTTTTTCGGCTTGGCGCTGTTCATCCTGGCCATCGCCACCTGCCTGCTGGGCATCAAGGAGAAGCTGCTTTTCAGCATCATGGCGACCTATTCCAAGTTTGTCCCAGAGGGAGTCCTGGCCAACGTGTTGGGATTGTTACTGCTCGTGTTCGGGGGGCTGGTAGGCTACATCTTGACGAGGGACGAGTTTAAACGCCCCCCGCACCCGGAGGAGGAAGCCCTGTCCATGCACTTCAAGACCCTGACTGAGGGAGAGAGCCCCAACAGCCCGTAA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K08360 CYB561; transmembrane ascorbate-dependent reductase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016867 True 792 mRNA 0.57 6 32863246 32871525

Neighbor

gene id symbol gene type direction distance location
AMCG00016864 NA coding downstream 170895 32674317 ~ 32692351 (-)
AMCG00016862 NA coding downstream 272712 32584019 ~ 32590534 (-)
AMCG00016857 wnk4,LOC108257086,LOC108429078,LOC105912834 coding downstream 316432 32545619 ~ 32546814 (-)
AMCG00016858 wnk4b,LOC107754305,LOC107582920,LOC107585056,LOC107740640,LOC107683678,LOC108429078 coding downstream 329487 32508349 ~ 32533759 (-)
AMCG00016860 NA coding downstream 393139 32469895 ~ 32470107 (-)
AMCG00016868 NA coding upstream 49480 32921005 ~ 32922249 (-)
AMCG00016871 NA coding upstream 50904 32922429 ~ 32924404 (-)
AMCG00016870 NA coding upstream 55506 32927031 ~ 32930813 (-)
AMCG00016869 NA coding upstream 60168 32931693 ~ 32934506 (-)
AMCG00016876 dcakd,LOC107667188 coding upstream 269913 33141438 ~ 33148429 (-)
G16293 NA non-coding downstream 1649 32859241 ~ 32861597 (-)
G16292 NA non-coding downstream 5781 32854781 ~ 32857465 (-)
G16250 NA non-coding downstream 426563 32434236 ~ 32436683 (-)
G16249 NA non-coding downstream 435166 32427852 ~ 32428080 (-)
G16248 NA non-coding downstream 437290 32425716 ~ 32425956 (-)
G16325 NA non-coding upstream 112729 32984254 ~ 32984464 (-)
G16375 NA non-coding upstream 384128 33255653 ~ 33256382 (-)
G16377 NA non-coding upstream 412489 33284014 ~ 33284227 (-)
G16378 NA non-coding upstream 420506 33292031 ~ 33292249 (-)
G16422 NA non-coding upstream 453561 33325086 ~ 33328341 (-)
AMCG00016859 NA other downstream 355927 32497507 ~ 32507319 (-)
G16247 NA other downstream 439808 32423058 ~ 32423438 (-)
AMCG00016847 NA other downstream 595278 32261549 ~ 32267968 (-)
AMCG00016815 NA other downstream 1474978 31380547 ~ 31388268 (-)
G15787 NA other downstream 2333746 30526292 ~ 30529500 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other upstream 304551 33176076 ~ 33178883 (-)
AMCG00016889 LOC107570748,LOC106906011 other upstream 520264 33391789 ~ 33434651 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other upstream 617200 33488725 ~ 33513579 (-)
G16563 NA other upstream 1235165 34106690 ~ 34107941 (-)
AMCG00016938 NA other upstream 2524467 35395992 ~ 35399030 (-)

Expression


Co-expression Network