AMCG00016868


Basic Information

Item Value
gene id AMCG00016868
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 32921005 ~ 32922249 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016868
ATGAAAGTGAACCTGCTGACTTTCTTGGCGATGCTCCTGGCCATGCCCTCAGGTCTTTCAGCTTATGAAGCCATACAGGAAGATGAGGATATCTTTGCCAGGAGGCCCTGCCCTGCATTCTTGATGTTTGACAATGCTGCTTACGTTAGTGATATGACCATAGAGCTCCCCTGCCACTGCAAACCAGAGGTTGTGCCCTCGGTGGTGTGGTACTACCAGAAACAGCTGGGGGTCAAGGACACGAGAGTCCTGACGGACTTCAACGGGACCAAGGTGGTGGACTCTGCACAGGTGGGAAGGGGGTTGGACATCCGCAGCCGCTTCTCAATCCGTCTCTTCAGCCTCCTGATCTTCCAGTCGCAAGCGGCTGACTCAGGCCACTACATCTGTGGGACGTCCACTGGGGAGTTCTTCTACGGCTATGATGTGGACATCCAGGAAGTGGGCGAGGTGTCTTTTTCCCTTGAACCCCAATCGCTGGGGCCGCCTGGGGATGCTGGGAGGATGCCACACTACCGGGTCTTCACCAGTTTCTGGCCCTGGTCTGTGTGTGACCGCTGTGGCATCAGGGGGGAGCAGACACGCGTGGGGCTGTGCTATCTGGAGAGCCCCTACCTCTACAGCCGCTACAGGCTTCAGCCCCCTGGAGTGGCGTCCTGTGGCTCGGCTTCTGTGCCCCAGCGCTTCAAGAAACATCTGCGGGAGAAGAGGGCGGAGCTCGCAGTCCGTAGCTGCATCACCAATTGCCCTCCGGAGCCCACGCTGCCTCCTGAGGAGAAATCCTTCTTAGACTTCCTGGGCTCCAGATCTGATGCTCCTAAACTCGTTGTCCAGTACTACAGTCACCCAGAGGGCCGCCCTCTCGTCCTGGCCTGCTCTGGAGCTCAAGCCAACAAAGCCGTCGCTTGGGATAAAGATCAGCTGCGGCTCTACCGGGCCCAGTACATGGAAGGAGTAAACAAAACGGCCCGGATGTACATCGATGCCAGCCAGCACTTGGTTTTCCGTGACGTGCAAATGAACGACGGGGGCACCTACTACTGCTGGCTCCAGGGCAAGCTAGCGGTGGAAATAAGACTCTCGATAACACGGCGCTTTGCTCGCAAGCGAAAACTCTCTGACCCCGAGTCGGTGTACGCCATGAAGGCTATTTTGTTGAGCTACACTGTGTTCACAGTCATCTTTGtcctatttttaattgtaaggCTTCTCTGGCAATATTTCATAGGCAGAGAAATGTTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016868 True 1245 mRNA 0.56 1 32921005 32922249

Neighbor

gene id symbol gene type direction distance location
AMCG00016867 NA coding downstream 49480 32863246 ~ 32871525 (-)
AMCG00016864 NA coding downstream 228654 32674317 ~ 32692351 (-)
AMCG00016862 NA coding downstream 330471 32584019 ~ 32590534 (-)
AMCG00016857 wnk4,LOC108257086,LOC108429078,LOC105912834 coding downstream 374191 32545619 ~ 32546814 (-)
AMCG00016858 wnk4b,LOC107754305,LOC107582920,LOC107585056,LOC107740640,LOC107683678,LOC108429078 coding downstream 387246 32508349 ~ 32533759 (-)
AMCG00016871 NA coding upstream 180 32922429 ~ 32924404 (-)
AMCG00016870 NA coding upstream 4782 32927031 ~ 32930813 (-)
AMCG00016869 NA coding upstream 9444 32931693 ~ 32934506 (-)
AMCG00016876 dcakd,LOC107667188 coding upstream 219189 33141438 ~ 33148429 (-)
AMCG00016878 NA coding upstream 233034 33155283 ~ 33160959 (-)
G16293 NA non-coding downstream 59408 32859241 ~ 32861597 (-)
G16292 NA non-coding downstream 63540 32854781 ~ 32857465 (-)
G16250 NA non-coding downstream 484322 32434236 ~ 32436683 (-)
G16249 NA non-coding downstream 492925 32427852 ~ 32428080 (-)
G16248 NA non-coding downstream 495049 32425716 ~ 32425956 (-)
G16325 NA non-coding upstream 62005 32984254 ~ 32984464 (-)
G16375 NA non-coding upstream 333404 33255653 ~ 33256382 (-)
G16377 NA non-coding upstream 361765 33284014 ~ 33284227 (-)
G16378 NA non-coding upstream 369782 33292031 ~ 33292249 (-)
G16422 NA non-coding upstream 402837 33325086 ~ 33328341 (-)
AMCG00016859 NA other downstream 413686 32497507 ~ 32507319 (-)
G16247 NA other downstream 497567 32423058 ~ 32423438 (-)
AMCG00016847 NA other downstream 653037 32261549 ~ 32267968 (-)
AMCG00016815 NA other downstream 1532737 31380547 ~ 31388268 (-)
G15787 NA other downstream 2391505 30526292 ~ 30529500 (-)
G16356 fzd2,LOC107583044,LOC107658461,LOC107729561,LOC106607305,LOC106601035 other upstream 253827 33176076 ~ 33178883 (-)
AMCG00016889 LOC107570748,LOC106906011 other upstream 469540 33391789 ~ 33434651 (-)
AMCG00016891 limd2,LOC107674139,LOC107658411 other upstream 566476 33488725 ~ 33513579 (-)
G16563 NA other upstream 1184441 34106690 ~ 34107941 (-)
AMCG00016938 NA other upstream 2473743 35395992 ~ 35399030 (-)

Expression


Co-expression Network