G89913


Basic Information

Item Value
gene id G89913
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030131.1
NCBI id CM030131.1
chromosome length 33043351
location 1111954 ~ 1112159 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU112139
gtaaagaagtgtctcctgtttcccgttttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgcgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttccctcagtctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112139 True 206 lncRNA 0.50 1 1111954 1112159

Neighbor

gene id symbol gene type direction distance location
AMCG00017390 NA coding upstream 223960 855278 ~ 887994 (+)
AMCG00017389 NA coding upstream 671660 421509 ~ 440294 (+)
AMCG00017385 NA coding upstream 940207 109675 ~ 171747 (+)
AMCG00017392 lbx2,LOC105028271,LOC106604581,LOC106611617 coding downstream 153283 1265442 ~ 1267334 (+)
AMCG00017399 NA coding downstream 622273 1734432 ~ 1736022 (+)
AMCG00017398 NA coding downstream 646227 1758386 ~ 1768848 (+)
AMCG00017402 NA coding downstream 760468 1872627 ~ 1875428 (+)
AMCG00017403 NA coding downstream 764517 1876676 ~ 1894462 (+)
G89908 NA non-coding upstream 140690 970643 ~ 971264 (+)
G89901 NA non-coding upstream 196741 915003 ~ 915213 (+)
G89898 NA non-coding upstream 233301 877911 ~ 878653 (+)
G89896 NA non-coding upstream 365955 745754 ~ 745999 (+)
G89837 NA non-coding upstream 709488 342615 ~ 402466 (+)
G89938 NA non-coding downstream 228742 1340901 ~ 1341295 (+)
G89983 NA non-coding downstream 468824 1580983 ~ 1589805 (+)
G90042 NA non-coding downstream 816983 1929142 ~ 1934784 (+)
G90070 NA non-coding downstream 890879 2003038 ~ 2004606 (+)
G90144 NA non-coding downstream 1349723 2461882 ~ 2504164 (+)
AMCG00017388 LOC108267694,LOC106608525 other upstream 900018 207586 ~ 211936 (+)
AMCG00017386 dctn1,LOC101464740 other upstream 1013557 48007 ~ 98397 (+)
AMCG00017422 leprotl1,LOC103152176 other downstream 1575261 2687420 ~ 2695453 (+)
AMCG00017445 NA other downstream 3480643 4592802 ~ 4606571 (+)
AMCG00017446 NA other downstream 3550466 4662625 ~ 4688223 (+)
AMCG00017486 NA other downstream 5617579 6729738 ~ 7188643 (+)
G90877 NA other downstream 6556024 7668183 ~ 7671850 (+)

Expression


Co-expression Network