Gene
RNA
| Item | Value |
|---|---|
| gene id | G90139 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030131.1 |
| NCBI id | CM030131.1 |
| chromosome length | 33043351 |
| location | 2285225 ~ 2285529 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| casein kinase II subunit alpha-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU112399 | True | 305 | lncRNA | 0.43 | 1 | 2285225 | 2285529 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00017406 | NA | coding | downstream | 253009 | 2023432 ~ 2032216 (-) |
| AMCG00017408 | pank2,LOC107391889,LOC107103406,LOC101161204 | coding | downstream | 269663 | 2005759 ~ 2015562 (-) |
| AMCG00017407 | loxl3,LOC108441751 | coding | downstream | 291684 | 1985621 ~ 1993541 (-) |
| AMCG00017410 | NA | coding | downstream | 320661 | 1948160 ~ 1964564 (-) |
| AMCG00017409 | loxl3,LOC106612874 | coding | downstream | 338300 | 1937122 ~ 1946925 (-) |
| AMCG00017417 | letm1 | coding | upstream | 243386 | 2528915 ~ 2566277 (-) |
| AMCG00017425 | NA | coding | upstream | 556393 | 2841922 ~ 3087650 (-) |
| AMCG00017430 | ctnna2 | coding | upstream | 1144092 | 3429621 ~ 3487525 (-) |
| AMCG00017431 | ctnna2,LOC102793143,LOC107706127,LOC103137875 | coding | upstream | 1244154 | 3529683 ~ 3539396 (-) |
| AMCG00017434 | ctnna2,ctnna1,LOC107594905,LOC107750356 | coding | upstream | 1452284 | 3737813 ~ 3747843 (-) |
| G90129 | NA | non-coding | downstream | 99486 | 2185385 ~ 2185739 (-) |
| G90098 | NA | non-coding | downstream | 205981 | 2079040 ~ 2079244 (-) |
| G90093 | NA | non-coding | downstream | 229862 | 2054839 ~ 2055363 (-) |
| G90066 | LOC107678491 | non-coding | downstream | 358374 | 1925208 ~ 1926851 (-) |
| G90017 | NA | non-coding | downstream | 453697 | 1827680 ~ 1831528 (-) |
| G90157 | NA | non-coding | upstream | 87581 | 2373110 ~ 2464259 (-) |
| G90221 | suclg1,LOC107746879 | non-coding | upstream | 435897 | 2721426 ~ 2722298 (-) |
| G90226 | NA | non-coding | upstream | 550990 | 2836519 ~ 2836798 (-) |
| G90243 | NA | non-coding | upstream | 653721 | 2939250 ~ 2939477 (-) |
| G90244 | NA | non-coding | upstream | 654406 | 2939935 ~ 2940143 (-) |
| AMCG00017384 | LOC106911887,LOC104963986 | other | downstream | 1933439 | 160054 ~ 351786 (-) |
| G89804 | NA | other | downstream | 2179340 | 105685 ~ 105885 (-) |
| AMCG00017418 | NA | other | upstream | 316254 | 2601783 ~ 2615562 (-) |
| AMCG00017426 | NA | other | upstream | 425773 | 2711302 ~ 2841894 (-) |
| G90400 | NA | other | upstream | 2257246 | 4542775 ~ 4544760 (-) |
| G90501 | NA | other | upstream | 2872855 | 5158384 ~ 5221021 (-) |
| G90502 | NA | other | upstream | 2936944 | 5222473 ~ 5223047 (-) |
