AMCG00018232


Basic Information

Item Value
gene id AMCG00018232
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4823825 ~ 4826013 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018232
ATGCCTTCCAATCGATCGGTCTCTGAGGCGCCAATCACACAGTTTGTAAACTGCAGGATCCTGAAAGACCATCGGCTGCAGAGGGAGGACCTCTGGGTGCGAGAGGGGAAGATTCTGAACCCAGAGAAGCTGTTCTTCGACGAGGAGGGGTTCGCAGACACCCAGGTGGATTGTCAGGACAGAATCATCGCCCCTGGGTTCATCGATGTTCAGATCAATGGTGAGGCCTTGTCTCTTCTTGGTTGTGCGGTGGTGGGGGTCTTCTTGGAGAACTGTCACCCCGTGCACAGGACAAAGTCTAGAGGAGGCTATGGTATCGACTTCTCCCAGGCCACCGATGATGTCAAAGGAGGGGTGGCTCTGGTGGCGAAGAAGATCCTGGCCCACGGCGTCACCTCCTTCTGTCCCACGCTAGTGACCTCACCCGCTCATATCTACCACAAGGTGCTTCCAGAGATTTCGGTTCACGATGGTGGCATTGAAGGTGCGGGGGTTGTGGGAGTTCACCTGGAGGGCCCCTTCATCAGCCTGGAGAAGAAAGGAGCGCACCCTGAACAATACTTGCGCAGTTTCCAGAACGGTGGCACCCGGGACCTGCTGGACACCTACGGCCACCTGGACAACGTCGGCATCGTGACGCTGGCCCCCGAGCTGCCCAACAGCAGGGAG

Function

GO:

id name namespace
GO:0006044 N-acetylglucosamine metabolic process biological_process
GO:0019262 N-acetylneuraminate catabolic process biological_process
GO:0005975 carbohydrate metabolic process biological_process
GO:0008448 N-acetylglucosamine-6-phosphate deacetylase activity molecular_function
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018232 True 669 mRNA 0.58 5 4823825 4826013

Neighbor

gene id symbol gene type direction distance location
AMCG00018229 NA coding downstream 37343 4763728 ~ 4786482 (-)
AMCG00018228 NA coding downstream 62692 4746580 ~ 4761133 (-)
AMCG00018227 stub1,LOC106601937 coding downstream 79253 4736365 ~ 4744572 (-)
AMCG00018226 NA coding downstream 125923 4695362 ~ 4697902 (-)
AMCG00018230 NA coding downstream 133946 4688815 ~ 4689879 (-)
AMCG00018239 NA coding upstream 323887 5149900 ~ 5155174 (-)
AMCG00018240 NA coding upstream 329359 5155372 ~ 5171519 (-)
AMCG00018246 nubp2,LOC102775692 coding upstream 380370 5206383 ~ 5212355 (-)
AMCG00018248 NA coding upstream 396874 5222887 ~ 5225675 (-)
AMCG00018247 NA coding upstream 407607 5233620 ~ 5269405 (-)
G115071 NA non-coding downstream 2414 4820965 ~ 4821411 (-)
G115037 NA non-coding downstream 144076 4679540 ~ 4679749 (-)
G115021 NA non-coding downstream 233757 4589295 ~ 4590068 (-)
G114941 NA non-coding downstream 436934 4385933 ~ 4386891 (-)
G114915 NA non-coding downstream 471462 4295311 ~ 4352363 (-)
G115100 NA non-coding upstream 210718 5036731 ~ 5058586 (-)
G115144 NA non-coding upstream 327039 5153052 ~ 5203873 (-)
G115157 NA non-coding upstream 401967 5227980 ~ 5243187 (-)
G115160 NA non-coding upstream 405605 5231618 ~ 5233417 (-)
G115170 NA non-coding upstream 453073 5279086 ~ 5279296 (-)
AMCG00018220 NA other downstream 172184 4646147 ~ 4651641 (-)
G115020 NA other downstream 235528 4586062 ~ 4588297 (-)
G114838 NA other downstream 736794 4028016 ~ 4087031 (-)
AMCG00018142 NA other downstream 2176014 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 2214346 2609145 ~ 2609479 (-)
G115174 NA other upstream 460373 5286386 ~ 5287873 (-)
G115183 NA other upstream 474094 5300107 ~ 5304429 (-)
AMCG00018251 natd1,LOC107745813 other upstream 530833 5356846 ~ 5366754 (-)
G115320 NA other upstream 1124408 5950421 ~ 5951055 (-)
AMCG00018291 NA other upstream 1784620 6610633 ~ 6652773 (-)

Expression


Co-expression Network