AMCG00018900


Basic Information

Item Value
gene id AMCG00018900
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 25245645 ~ 25261282 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018900
CTACAAACACGCGTGCGAGAAAGACGAATGGCGTTTGTTTACGCCACCTTACGGAATCATATGGGTCTGTCTTGACTAAATTAAACATCCaagtttatgtatgtatgtatttattttattttatttcatttcagtgcgtgagtaaattattttaaaaggaaaataataactgtaacACCATTTTCCCGCTCACTAAAACAACATCACAACGAATATATGGAACTTTGTCACCTAAGGAAAAACCACACCACACACTATGAAGTGTTTAATAACAGGAGCAAACGTGAAAGCATTTGGAAAAACAATCCATGCACTTGCACGTATTGGGGACGAGATATGGCTTGACCCCCTGGAGAAAGGACTGGCGATAAGTTCAGTGAACTCCTCCCACTCTGCGTATGCCTGCTTCCTGTTTTCCCCACTGTTCTTCCAGCAGTACTACACAGGGCAACAGTCCCCCTCAGACTCTGGAGATGGGAAGACAGTCCTCAAGTGCAAACTGGCTTTGAAGTCAATACTACCCCTCTTCAGATGCCTGGCAACTATTGAAAGGAATGTGGACCGATGTAAAATTGCCATTAACTTCACAGACGGCCGAGTGATTTTCCAGTTTTTCTGCAAGCACGGTCTAACCAAAACCCACAATCTGGGCTTTCAGGAGTGTGAATCTCTGCAGGCTGTGTTTCCCAGACATCTCTGTCCTAATGTCTTGAAGGTACAGGCCAGACATCTAGGAGAAATTGTGATGCACTTTCCAGTCTCACAGGAAGAAATCACTTTGACCGTGACTCCACTGAAGGTGAACTTCAAGAACTACTATGAAGAGGAAATGGCTTACTGGAAGAAGACCATGCACACAGAGGCCACCCTGCACCCAGATGAGTTTGAGTATTTCCAGGTCAGCCTGGACTCAGAAATAACCTTCTGCCTGAAGGAGCTGAGGGGATTGCTGTCTTTTGCGGAGTCCCATGGGTTATCGGTGTCCATCCACTTTGGAACAGCAGGAAAACCAGTGGCATTCAGCATAGAGGACATGGTGCTGGAGGCAAGCGTGGTGTTGGCCACTTTGACGGACCCCGAGAGCATTCGCATCTCCCAGAGAGACGGGTCCCAGCTGGAGGACTTCCCCAGGTGCAGAGGCCACATGACCCCCAGTGCCCCCCCAGCTGTAGACCATACCAATGAGATTCCACAAGCTGCTGCAGTGAGAGGCATGATTGCCATGGATACGTTCCACTCTCTGTTCTTCGGTGCGCTGTCCACGGTGCAGGTTGGCGCTCCCGTCCTGGTGCTGCCCAGTCTAGCGTGTTCCAGCGACACGGAGGAGGAGGCAGGCGAGGACAAGACCCAGCCCTACCAGGCTTTCCGATAGCTGACATTGCAGCTTACAGAACATCCTTCTAATTTCCCCACAATCACAGGGTCAGCACATTGTCAcatcattcattaatttagcCAGTTCGAAAAGGGTCCTTTAGACTCGAATCACAACAGTCAGTTCTGTTAAAGGCCACATTGTCACTCCAGATGCCTGCTGCAGAAGAAAGACTAAATTTTATCTTTAGGAGTTATGGTTGTTCTCAAACACAATCAATCAGTCCTCTTCTGTCCATCCTCAAGCTCTGGCTTTCCCTTCATTACAGTGTTTGTTTCAAAAACAGTCAGgcagttacatttaaaacccaTGCATGCTTTATTCTCGGGCTAACCATCAACTGTCTCTTAA

Function

GO: NA

KEGG:

id description
K10994 RAD9A; cell cycle checkpoint control protein RAD9A

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018900 True 1726 mRNA 0.47 11 25245645 25261282

Neighbor

gene id symbol gene type direction distance location
AMCG00018901 LOC103152401,LOC106931442,LOC103469522,LOC102221826,LOC101074150,LOC101161315,LOC105014186,LOC106579958,LOC103397036 coding upstream 32490 25203672 ~ 25213155 (+)
AMCG00018902 LOC103365013,LOC102776280 coding upstream 56803 25171485 ~ 25188842 (+)
AMCG00018908 NA coding upstream 100847 25136587 ~ 25144798 (+)
AMCG00018897 LOC106585468,LOC104958862 coding upstream 128226 25091131 ~ 25117419 (+)
AMCG00018899 NA coding upstream 155360 25084176 ~ 25090285 (+)
AMCG00018909 NA coding downstream 26126 25287408 ~ 25294157 (+)
AMCG00018915 NA coding downstream 272821 25534103 ~ 25544880 (+)
AMCG00018914 NA coding downstream 294174 25555456 ~ 25582394 (+)
AMCG00018918 mtfp1,LOC102779258 coding downstream 323034 25584316 ~ 25592691 (+)
AMCG00018919 NA coding downstream 340637 25601919 ~ 25611337 (+)
G119429 NA non-coding upstream 394595 24850836 ~ 24851050 (+)
G119416 NA non-coding upstream 409936 24799950 ~ 24835709 (+)
G119419 NA non-coding upstream 435826 24807747 ~ 24809819 (+)
G119354 NA non-coding upstream 646631 24537666 ~ 24599014 (+)
G119523 NA non-coding downstream 41904 25303186 ~ 25313495 (+)
G119529 LOC108239856,LOC103139559,LOC107385499,LOC103366907 non-coding downstream 70108 25331390 ~ 25338189 (+)
G119574 NA non-coding downstream 224563 25485845 ~ 25488149 (+)
G119669 NA non-coding downstream 777997 26039279 ~ 26078413 (+)
G119682 NA non-coding downstream 846187 26107469 ~ 26107849 (+)
AMCG00018820 NA other upstream 3347945 21848370 ~ 21897700 (+)
G118815 NA other upstream 4056399 21187956 ~ 21189246 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other upstream 4473059 20723610 ~ 20772586 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other upstream 4550451 20679280 ~ 20695194 (+)
AMCG00018792 LOC106928543 other upstream 4642330 20601956 ~ 20603315 (+)
AMCG00018913 NA other downstream 204809 25466091 ~ 25485446 (+)
AMCG00018922 med13l other downstream 417395 25678677 ~ 25718426 (+)
G119762 NA other downstream 1199338 26460620 ~ 26461227 (+)

Expression


Co-expression Network