AMCG00019384


Basic Information

Item Value
gene id AMCG00019384
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 17783334 ~ 17793587 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019384
GTAGATGATCTCACCGTGTTCAATTGCAACACAAATCCCACATTTCACATGATGGCTGACTTCACAGTGTGCATACTGACGGTCTTACTGTCGATTGTAGTTTGGTTGGTGTTTTGCGGCAGAAAAAGGCAAGATGATGAACCTCCacttgaaaatggatggattcCTTTTCTTGGAATTGCCCTTGAATTTAGAAAAAATCCCCTGGAATTCCTCAGacgaaaacaaaggaaatatggAGACACTTTTACTTGCAAAATGGCTGGCAGTTACTTCACTTTCATAATGGACCCATTTTCATACAGTGCTGTATATCGGCAAGGGAAATACCTTGATTTTCAGAAGTTTGCTATTGACATCTCAAAGAAGgttTTTGGTCATGCTGATTTTAGTGACCCCCTTTACAATGGAAATTACGACAAAGTACATTCTTTATTCCGTCAGACGCTTCAAGGGCCAGCTCTGCATGGTTTGACCTCAAGCATGATGGAGAACTTGCAAATTGTCTTGCTGAGAGGTAAGCCATCAGAGTGGACAACAGAAGGGCTTCAGAGCTTTGCATCTCGAATAATGTTTGAAGCTGGCTATCGGACATTGTTTGGAAAAGAGGAAAATGCCACAGGAGACAATAACGGGGAGCCAATGTCCAAAGccataaaatatttcaatgtgtttGATGAAGCTTTCCCTGAAATAGCTGCAGGATTTCCTATCTACCTTCTGAAGAAAGCACATGCAGCCAGAGAAGCCCTAACTGAAAGGCTTCAACAcaaatatctgaaaaagaaCAAGTGTCTGTCAGCTCTGATCGAGCAGAGAATGAACTGTTTTGATCAAATGGCATTTCTTGATGAGCTGGGAAAAGCAAGAACGCATGTAGTTATGCTTTGGGCATCTCAAGCTAATACCCTACCTGCAGCATTCTGGAGCCTGTATTACACTCTCAGGTCAGCTGAAGCCCGGGAAGCGGCCCAAAGTGAAGTAGAGAAAGTCCTTCAGGAATCTGATCAAACAGCAGAAGATATTAAGAAACCACTGAAACTTTCTAAAGAACAACTGGATCGTATGTCAACCTTAGGCAGTATAATAGATGAAGCTTTGCGGCTTTCCAGTGCATCAATGATGATCCGGGTTGCACGTGAAAACTTTACTTTGAACTTGGATTCTGGTAAAAATGCAGCCATTCGCAAAGGAGATCGCATTGCCATGTTTCCTCAGATGGTGCACATGGATCCAGAAATCTATGAAGACCCCATGGAATTTAAATTCAATAGATTTTTGGATGACAATGGAAAAAAGAAGACATGTTTCTACAAAAATGGTAGAAAACTGAAAACCTTCCTCATGCCATTTGGATCTGGTGTTAGTGAATGCCCAGGACGCTTTTTTGCAGTGAATGAAATTAAACAGTTTTTGGCTTTAGTTATTTGCTATTATGACATGGAATTACAAGATGTTTATAACCCTCCTGTTGCTCTAGACTGTTCTCGGGCTGGTCTTGGAATCCTACCACCGATACATGATGTTGTTATGAGGTATAAACTAAAAGCTGACTTTCTAAAGTGAAAGTACAAGTTCAGTTaccttattttgtattataaatcaGGGTAGCATTTAAACAAGAAGAAGAGAACATTAAATGAATGgatgttattaaaaatgtatagtattttcagaaatgtttattttaaatgtacagaatgtTATACCACTATTTAACATgggttaaatattttatattctggTGCAGcaattaaatcagattaatcTTGATAAAGTATTGCACGgatgtggtcatcactatctcCCCCACTAGATCAACAATTATTCTGAGATATATATTTCAACCGGTCACCCACTTCATCTCTGTTGGTATCATTTGCTTCATCTACTTGCTCTAGattatgatatttttttttatgtacagtaaatgaataaacagattAACCATATACCAGGATATAGATGTCAATGCATGTCAGTTGTCTTCATATGCACCCAAAACAACATAATGTTTTAAGCACATGGTTATATTAGCTTCTGTTCTCTGCTACTAGGCTAAAAAAATGTGCAGCATATAATAGAAAGGGTTccttgatatattttatttttttaatttcttggaaaATCTTAGTAGAAACTAGTAGGTTATCCAACATCCATGATAAACATCATCTATGAGAACAACTCTTTCAAAATCTGATATGAACAATTTGTGCAATGGCAGGTCCTccgacatttcagttttttaaatattttacttaagGTTGATTCTTACTGCAATATTGTTGTAATTGTGACTGAAGATGTTGAATATATTGTTGCAGTTGTTGAATATATTGAAACAATTCTTTtgaaactgttatttatttaaataaatattgtgaagTGTACCATATGTATTTGTCAGATTCCAGCAGCTTGGCAGATCTGTATACACTTTTGTCAGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019384 True 2452 mRNA 0.37 6 17783334 17793587

Neighbor

gene id symbol gene type direction distance location
AMCG00019385 LOC108412264,LOC105893799,LOC107718110,LOC107693703,LOC107722516,LOC107691428 coding upstream 18668 17760073 ~ 17764666 (+)
AMCG00019387 NA coding upstream 44682 17724423 ~ 17738652 (+)
AMCG00019388 fam110b,LOC107589885,LOC105031585,LOC108247726 coding upstream 74719 17707530 ~ 17708615 (+)
AMCG00019382 NA coding upstream 146897 17628392 ~ 17636437 (+)
AMCG00019375 lyn,LOC107728263,LOC108432264,LOC103026730 coding upstream 367637 17385850 ~ 17415697 (+)
AMCG00019386 sdcbp coding downstream 6018 17799605 ~ 17804445 (+)
AMCG00019389 rab2a coding downstream 385662 18179249 ~ 18207126 (+)
AMCG00019394 NA coding downstream 437628 18231215 ~ 18239613 (+)
AMCG00019393 chd7,LOC107585562,LOC107688517,LOC107718105,LOC107589837,LOC106568873 coding downstream 464222 18257809 ~ 18296221 (+)
AMCG00019395 LOC102793628,LOC103377196,LOC107098905 coding downstream 543964 18337551 ~ 18378055 (+)
G33634 NA non-coding upstream 350706 17430953 ~ 17432628 (+)
G33615 NA non-coding upstream 358436 17422624 ~ 17424898 (+)
G33585 NA non-coding upstream 463299 17315673 ~ 17320035 (+)
G33521 NA non-coding upstream 725114 17057586 ~ 17058220 (+)
G33474 NA non-coding upstream 982407 16798149 ~ 16800927 (+)
G33750 NA non-coding downstream 349909 18143496 ~ 18144704 (+)
G33794 NA non-coding downstream 591297 18384884 ~ 18389982 (+)
G33795 NA non-coding downstream 601814 18395401 ~ 18395619 (+)
G33796 NA non-coding downstream 605429 18399016 ~ 18399743 (+)
G33800 NA non-coding downstream 637777 18431364 ~ 18438265 (+)
AMCG00019376 NA other upstream 330675 17449320 ~ 17452659 (+)
G33406 NA other upstream 1701391 16043942 ~ 16081943 (+)
AMCG00019345 NA other upstream 2156379 15554819 ~ 15626955 (+)
G33283 NA other upstream 2613493 15164348 ~ 15169841 (+)
G33159 LOC103376870 other upstream 3296628 14439253 ~ 14486706 (+)
AMCG00019402 NA other downstream 1211437 19005024 ~ 19021412 (+)
AMCG00019415 NA other downstream 1491949 19285536 ~ 19294208 (+)
AMCG00019428 LOC107595150 other downstream 1657660 19451247 ~ 19455137 (+)
G34170 rpl7 other downstream 2813887 20607474 ~ 20610889 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other downstream 4822036 22615623 ~ 22643226 (+)

Expression


Co-expression Network