AMCG00019759


Basic Information

Item Value
gene id AMCG00019759
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 43363001 ~ 43368277 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00019759
atGTCAACGAATGAAGAGCTGAAGATACGAATCCGGGAACTGGAAAACGAGTTgatcaaatgtaaacagaggAGAGGCACCGAGGAAGATGGCAGTAACAACCAGATGCCCCACAGACCCAAGATTGATAAAATGAGCGCAGAGGTGGTGGACTCCAATCCATACAGTCGTCTCATGGCGCTGAAACGGATGGGGATTGTGCAAGATTACGAGAAAAtccgcacacacacagtggctgTGGTGGGAGTCGGGGGAGTGGGCAGTGTGACTGCAGAGATGCTGACCAGATGTGGCATTGGTAAGCTGATCCTGTTTGATTATGACAAGGTGGAACTGGCCAACATGAACAGGCTGTTCTTCCAGCCTCATCAAGCAGGGTTGAGCAAAGTTGAAGCAGCAGAGCACACTCTGAGGAACATTAACCCTGATGTGAAGTTTGAGACCCATAACTACAACATCACCACAATGGACAATTTTACACACTTCATGGAGCGGATAAGTCATGGGGGCCTGGAGGAAGGGAAGGCAGTGGACCTGGTATTGAGCTGTGTGGACAACTTTGAAGCCCGCATGGCAATCAACACAGCTTGCAATGAACTCAGTCAGGTATGGATGGAGTCTGGGGTGAGTGAGAATGCCGTGTCGGGGCACATTCAGCTCATCATCCCTGGAGAAACCGCCTGCTTTGAGTGTGCGCCTCCTCTGGTGGTCGCGGCCAACATCGATGAGAAAACCCTGAAGAGAGACGGGGTCTGTGCCGCCAGCCTGCCTACCACCATGGGAGTGGTGGCGGGAATCCTTGTGCAGAATGTGCTGAAGTATCTGCTAGGCTTCGGCACAAAGAGAGAGGCAGTGCGACCCAGACAGGAAGAGGTGGAGGAAGCCGAGGAAGTGATTCACGAGGACAATGAGTGGGGCATAGAGCTTGTGTCGGAGGTCACGGAGAAGGAGCTGGAGGCAGCCTCGGGCCCGGTGCCGGACTTACCCGAAGGGATCACGGTGGCTTACACCATTCCACAACAGGAGgaggcagcagcaggagagacAGTGCCAGAGAGTGACCAGAGCCTGGAGGAGCTCATGGCCCAGATGAGCCAG

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0048037 obsolete cofactor binding molecular_function
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor molecular_function

KEGG:

id description
K12164 UBA5, UBE1DC1; ubiquitin-like modifier-activating enzyme 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00019759 True 1098 mRNA 0.54 12 43363001 43368277

Neighbor

gene id symbol gene type direction distance location
AMCG00019762 NA coding upstream 60025 43299078 ~ 43302976 (+)
AMCG00019753 NA coding upstream 622662 42717933 ~ 42740339 (+)
AMCG00019750 NA coding upstream 700508 42654647 ~ 42662493 (+)
AMCG00019746 NA coding upstream 810328 42545447 ~ 42552673 (+)
AMCG00019745 prpf4b,LOC106597319,LOC107670278 coding upstream 835793 42508602 ~ 42527208 (+)
AMCG00019764 cdyl,LOC107689409 coding downstream 159170 43527447 ~ 43552305 (+)
AMCG00019766 NA coding downstream 196809 43565086 ~ 43566039 (+)
AMCG00019767 fars2,LOC103399687 coding downstream 334266 43702543 ~ 43705085 (+)
AMCG00019770 NA coding downstream 580758 43949035 ~ 43964268 (+)
AMCG00019773 rreb1 coding downstream 646233 44014510 ~ 44044675 (+)
G36936 NA non-coding upstream 130355 43232356 ~ 43232646 (+)
G36910 NA non-coding upstream 412579 42950206 ~ 42950422 (+)
G36895 NA non-coding upstream 494367 42868402 ~ 42868634 (+)
G36845 NA non-coding upstream 759979 42602809 ~ 42603022 (+)
G36844 NA non-coding upstream 777849 42584858 ~ 42585152 (+)
G37000 NA non-coding downstream 91169 43459446 ~ 43550548 (+)
G37011 NA non-coding downstream 207971 43576248 ~ 43577257 (+)
G37068 LOC103376870 non-coding downstream 545915 43914192 ~ 43914819 (+)
G37070 NA non-coding downstream 565826 43934103 ~ 43934319 (+)
G37102 NA non-coding downstream 678052 44046329 ~ 44051431 (+)
G36954 NA other upstream 29688 43330292 ~ 43333313 (+)
AMCG00019758 NA other upstream 91809 43261894 ~ 43271192 (+)
AMCG00019755 NA other upstream 400343 42960656 ~ 42962658 (+)
AMCG00019751 NA other upstream 735896 42624730 ~ 42627105 (+)
AMCG00019747 tubb6,LOC108431516,LOC100711323,LOC107688430 other upstream 790921 42556540 ~ 42572080 (+)
G37105 ssr1 other downstream 684797 44053074 ~ 44056603 (+)
AMCG00019785 NA other downstream 1067645 44435922 ~ 44443756 (+)
G37372 sugct,LOC107687505 other downstream 1911178 45279455 ~ 45569937 (+)
G37561 LOC100136012 other downstream 3422750 46791027 ~ 46791485 (+)
AMCG00019820 efr3a other downstream 4254491 47622768 ~ 47658001 (+)

Expression


Co-expression Network