Gene
RNA
| Item | Value |
|---|---|
| gene id | G30539 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 73888 ~ 74150 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006325 | chromatin organization | biological_process |
| GO:0008213 | protein alkylation | biological_process |
| GO:0043414 | macromolecule methylation | biological_process |
| GO:0006479 | protein methylation | biological_process |
| GO:0016569 | covalent chromatin modification | biological_process |
| GO:0016570 | histone modification | biological_process |
| GO:0016571 | histone methylation | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU38186 | True | 263 | lncRNA | 0.56 | 1 | 73888 | 74150 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018972 | kcnh2,kcnh2b,LOC106590277 | coding | downstream | 18776 | 26747 ~ 55112 (-) |
| AMCG00018973 | NA | coding | downstream | 48093 | 14785 ~ 25795 (-) |
| AMCG00018976 | NA | coding | upstream | 20667 | 94817 ~ 100254 (-) |
| AMCG00018974 | LOC107574283 | coding | upstream | 93892 | 168042 ~ 171990 (-) |
| AMCG00018985 | NA | coding | upstream | 117644 | 191794 ~ 197598 (-) |
| AMCG00018986 | NA | coding | upstream | 207684 | 281834 ~ 290903 (-) |
| AMCG00018987 | NA | coding | upstream | 224684 | 298834 ~ 309982 (-) |
| G30593 | NA | non-coding | upstream | 185284 | 259434 ~ 260065 (-) |
| G30594 | sspo | non-coding | upstream | 191923 | 266073 ~ 267927 (-) |
| G30612 | NA | non-coding | upstream | 339738 | 413888 ~ 414282 (-) |
| G30760 | NA | non-coding | upstream | 447969 | 522119 ~ 523996 (-) |
| G30784 | NA | non-coding | upstream | 638562 | 712712 ~ 733413 (-) |
| AMCG00018975 | kcnh2b,kcnh2,LOC107713341,LOC106590277 | other | upstream | 70103 | 144253 ~ 154525 (-) |
| AMCG00018988 | NA | other | upstream | 151224 | 225374 ~ 337633 (-) |
| AMCG00018992 | NA | other | upstream | 378805 | 452955 ~ 454764 (-) |
| AMCG00018991 | NA | other | upstream | 399299 | 473449 ~ 477096 (-) |
| G30729 | NA | other | upstream | 424582 | 498732 ~ 500189 (-) |
