Gene
RNA
| Item | Value |
|---|---|
| gene id | G31300 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030124.1 |
| NCBI id | CM030124.1 |
| chromosome length | 51038645 |
| location | 2566801 ~ 2571288 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko00020 | Citrate cycle (TCA cycle) |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU39218 | True | 310 | lncRNA | 0.57 | 2 | 2566801 | 2571288 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019087 | NA | coding | downstream | 41672 | 2520913 ~ 2525129 (-) |
| AMCG00019085 | NA | coding | downstream | 82062 | 2471464 ~ 2484739 (-) |
| AMCG00019084 | smarcd3,LOC106578675 | coding | downstream | 132726 | 2409940 ~ 2434075 (-) |
| AMCG00019077 | abcf2 | coding | downstream | 179652 | 2380537 ~ 2387149 (-) |
| AMCG00019079 | NA | coding | downstream | 208946 | 2342598 ~ 2357855 (-) |
| AMCG00019092 | NA | coding | upstream | 67212 | 2638500 ~ 2657544 (-) |
| AMCG00019091 | arf1,arf3,LOC103038497,LOC102781726,LOC107671731 | coding | upstream | 105027 | 2676315 ~ 2686173 (-) |
| AMCG00019093 | wnt3a,LOC107661901 | coding | upstream | 186812 | 2758100 ~ 2759745 (-) |
| AMCG00019094 | wnt3a | coding | upstream | 197492 | 2768780 ~ 2785358 (-) |
| AMCG00019097 | NA | coding | upstream | 506602 | 3077890 ~ 3094196 (-) |
| G31296 | NA | non-coding | downstream | 4007 | 2561475 ~ 2562794 (-) |
| G31246 | NA | non-coding | downstream | 57607 | 2500133 ~ 2509194 (-) |
| G31245 | NA | non-coding | downstream | 70234 | 2494716 ~ 2496567 (-) |
| G31244 | NA | non-coding | downstream | 72746 | 2493837 ~ 2494055 (-) |
| G31236 | NA | non-coding | downstream | 86386 | 2479938 ~ 2480415 (-) |
| G31329 | NA | non-coding | upstream | 63896 | 2635184 ~ 2638120 (-) |
| G31346 | NA | non-coding | upstream | 283160 | 2854448 ~ 2856659 (-) |
| G31363 | jmjd4,LOC107727496,LOC107661892 | non-coding | upstream | 525421 | 3096709 ~ 3097340 (-) |
| G31390 | NA | non-coding | upstream | 617439 | 3188727 ~ 3190187 (-) |
| G31399 | NA | non-coding | upstream | 640116 | 3211404 ~ 3211605 (-) |
| G31130 | NA | other | downstream | 388151 | 2177980 ~ 2178650 (-) |
| G31082 | NA | other | downstream | 483530 | 1932341 ~ 2083271 (-) |
| AMCG00019059 | NA | other | downstream | 670369 | 1882454 ~ 1896432 (-) |
| G31035 | NA | other | downstream | 856258 | 1705899 ~ 1710543 (-) |
| AMCG00019034 | NA | other | downstream | 1243205 | 1321614 ~ 1323596 (-) |
| AMCG00019109 | NA | other | upstream | 1649155 | 4220443 ~ 4229991 (-) |
| AMCG00019129 | NA | other | upstream | 2361061 | 4932349 ~ 4940667 (-) |
| AMCG00019128 | gorasp1,LOC103377203 | other | upstream | 2369771 | 4941059 ~ 4986384 (-) |
| AMCG00019165 | NA | other | upstream | 4109337 | 6680625 ~ 6684301 (-) |
| AMCG00019209 | LOC106600477 | other | upstream | 6275863 | 8847151 ~ 8901878 (-) |
