G34433


Basic Information

Item Value
gene id G34433
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 22789008 ~ 22789463 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU43106
CTGGATTTAGGAGTGTCAAATAACCCCATGGATCTTCTTTAACTACCACAGGCTGAGAAGCACTCGTGGAAAGCGATGCTGCACTTGAATGCCTACCTGCCATGGTGTCTTTCCTGGAAGTGTGCTCTCCTTTGTTTCCATGGTAACTCGCATTTGTTCCAGTTGACTCGTAGTCGGTCTTCCTTTCCTTGAGGCTGATCATCTCTCGAGGTGAGGCAGGGGCACTTGCTACAAACAAGGAAATCATCCACATAATGCACAATAAGCATTTGGCAGTTTTGACAGCATCAACAATTCTGGTCTGAATTCTCAGATGTACTCCCCAGTGTACAAAAAAGCCATTAGTCTTTTATCTTCTATCAAATCTTTTTGATTCCTCCTTACAGGTAGCTTTAGAGTagataatgaaatatataactctgagaaatgtgtgtgtttgtcatcCACAATCTCatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43106 True 456 lncRNA 0.42 1 22789008 22789463

Neighbor

gene id symbol gene type direction distance location
AMCG00019477 NA coding upstream 86972 22693692 ~ 22702036 (+)
AMCG00019479 NA coding upstream 100731 22670411 ~ 22688277 (+)
AMCG00019478 ropn1l coding upstream 132099 22644268 ~ 22656909 (+)
AMCG00019470 cct5,LOC107686714,LOC107695377 coding upstream 200874 22582760 ~ 22588134 (+)
AMCG00019469 sema5a,LOC108426609,LOC106578437 coding upstream 334479 22390170 ~ 22454529 (+)
AMCG00019488 NA coding downstream 777118 23566581 ~ 23575527 (+)
AMCG00019494 NA coding downstream 1305832 24095295 ~ 24102633 (+)
AMCG00019493 NA coding downstream 1319499 24108962 ~ 24149017 (+)
AMCG00019495 NA coding downstream 1364034 24153497 ~ 24178723 (+)
AMCG00019499 NA coding downstream 1390732 24180195 ~ 24182210 (+)
G34432 LOC107584984,LOC108256437,LOC107701635 non-coding upstream 5892 22780231 ~ 22783116 (+)
G34378 NA non-coding upstream 211536 22575974 ~ 22577472 (+)
G34278 NA non-coding upstream 1327117 21461682 ~ 21461891 (+)
G34235 NA non-coding upstream 1698592 21090144 ~ 21090416 (+)
G34204 NA non-coding upstream 2012392 20771526 ~ 20776616 (+)
G34435 NA non-coding downstream 9937 22799400 ~ 22799718 (+)
G34436 LOC107686039,LOC107746909 non-coding downstream 28680 22818143 ~ 22818460 (+)
G34438 NA non-coding downstream 91717 22881180 ~ 22888739 (+)
G34445 LOC107590286,LOC107591257,LOC107701635,LOC108438556 non-coding downstream 139557 22929020 ~ 22929310 (+)
G34446 NA non-coding downstream 173994 22963457 ~ 22963998 (+)
AMCG00019475 march6,LOC105024238,LOC102207159,LOC101475102,LOC102312386,LOC104929871,LOC100690953,LOC102783154,LOC107746911,LOC107686038,LOC107732575 other upstream 145782 22615623 ~ 22643226 (+)
G34170 rpl7 other upstream 2178119 20607474 ~ 20610889 (+)
AMCG00019428 LOC107595150 other upstream 3333871 19451247 ~ 19455137 (+)
AMCG00019415 NA other upstream 3494800 19285536 ~ 19294208 (+)
AMCG00019402 NA other upstream 3767596 19005024 ~ 19021412 (+)
AMCG00019481 NA other downstream 396353 23185816 ~ 23204250 (+)
AMCG00019480 NA other downstream 443807 23233270 ~ 23248099 (+)
G34511 zfhx4,LOC107590192,LOC107721891 other downstream 882662 23672125 ~ 23695801 (+)
AMCG00019492 NA other downstream 1256226 24045689 ~ 24086481 (+)
AMCG00019496 NA other downstream 1426414 24215877 ~ 24219991 (+)

Expression


Co-expression Network