AMCG00020026


Basic Information

Item Value
gene id AMCG00020026
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 6986536 ~ 7008056 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020026
GATTAAAAGATCTCATTGGCATGTTACTATGGAAGGACAGCACAGTCACCATCAGCACAGTCTAGAAGACCAGAACAAACTCCTCTATAATCTCCCTGGGCAGGATTACCAGCATGAAGGCCAGAGAAACATGCCTGCCTACCAGTACTGCTGCACCCTGGCTAATTTCAGAATCGAGAAGAAGATTGGCAGAGGGCAGTTCAGCGAGGTGTACCGGGCGACGTATCTCTTTGATGGAAAGCAGGTCGCTTTGAAAAAAGTCCAGATTTTTGAAATGATGGACGCCAAAGCAAGACAAGACTGTATCAAGGAAATAGACCTTCTTAAGCAATTGAATCATCCCAATGTTATTAAGTATTTGGATTCTTTTATTGAGGAGAATGAATTGAACATTGTTCTAGAATTAGCAGACGCGGGTGATCTCTCTCAGATGATAAAGTGTTTCGGCAGTGGCTGTGTGACTGACATGGGTTGGGGGTGCCAGATTGCTCATTGCCTATTCCctcatcttttatttattcttgttccacagtattttaaaaagaagaggCGACTCATCCCTGAAAGGACAATATGGAAATATTTTGTGCAGCTATGCAGCGCGGTGGAACACATGCATTCCCGCAGAGTGATGCACAGGGacATAAAGCCGGCAAACGTGTTCATAACCGCAACTGGGGAGGTTAAACTGGGAGACCTGGGACTGGGCCGGTTCTTCAGCTCCAAGACCACAGCAGCACATTCCTTAGGTAGGGAGAGAATTGAGCCGGGTCACATTCGGGGGGCCAGTGTAGGGCGATACCACTACGctactgtttgtcttgtgttcACTCTTTGC

Function

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020026 True 838 mRNA 0.46 6 6986536 7008056

Neighbor

gene id symbol gene type direction distance location
AMCG00020025 NA coding downstream 63063 6898884 ~ 6923473 (-)
AMCG00020024 NA coding downstream 89547 6869573 ~ 6896989 (-)
AMCG00020018 olm2a,olfml2a,LOC104951789,LOC107554414 coding downstream 395433 6569055 ~ 6591103 (-)
AMCG00020011 NA coding downstream 641844 6342787 ~ 6344692 (-)
AMCG00020013 NA coding downstream 653169 6329008 ~ 6333367 (-)
AMCG00020027 lhx2,lhx2b coding upstream 104757 7112813 ~ 7126623 (-)
AMCG00020035 NA coding upstream 355998 7364054 ~ 7385762 (-)
AMCG00020034 NA coding upstream 420956 7429012 ~ 7444494 (-)
AMCG00020033 NA coding upstream 437425 7445481 ~ 7453075 (-)
AMCG00020039 ntng2a,LOC103151468,LOC107664998,LOC104943762 coding upstream 499305 7507361 ~ 7515691 (-)
G60387 NA non-coding downstream 185786 6797909 ~ 6800750 (-)
G60377 NA non-coding downstream 290760 6679178 ~ 6695776 (-)
G60356 NA non-coding downstream 497159 6487309 ~ 6489377 (-)
G60345 NA non-coding downstream 541803 6443275 ~ 6444733 (-)
G60317 NA non-coding downstream 627597 6300656 ~ 6358939 (-)
G60540 NA non-coding upstream 564541 7572597 ~ 7572831 (-)
G60610 NA non-coding upstream 844945 7853001 ~ 7854373 (-)
G60656 NA non-coding upstream 1036553 8044609 ~ 8047241 (-)
G60723 NA non-coding upstream 1785912 8793968 ~ 8796315 (-)
G60725 NA non-coding upstream 1790908 8798964 ~ 8799167 (-)
AMCG00020019 NA other downstream 515102 6467271 ~ 6471434 (-)
G60348 NA other downstream 519950 6463548 ~ 6466586 (-)
AMCG00020017 arpc5l,arpc5la,LOC107571143,LOC107753090,LOC108411248 other downstream 525108 6450622 ~ 6461428 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other downstream 814062 6159577 ~ 6172474 (-)
AMCG00019992 NA other downstream 1693863 5291590 ~ 5292673 (-)
G60516 NA other upstream 432747 7440803 ~ 7562592 (-)
AMCG00020066 fam69b,fa69b other upstream 1804729 8812785 ~ 8828109 (-)
G60746 NA other upstream 1831155 8839211 ~ 8839945 (-)
G61170 NA other upstream 3747412 10755468 ~ 10756419 (-)
G61269 NA other upstream 4687635 11695691 ~ 11701645 (-)

Expression


Co-expression Network