AMCG00020611


Basic Information

Item Value
gene id AMCG00020611
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 25920639 ~ 25932142 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020611
AAAATCcggcagggtagggggtcctgcaggacaagaacaaagaaaaagacagggCCGGTTTATTGTGGCTTCATCGCTTCTGGATAGGATCAGggcattttaacttttttgttacTTAATCTGTGTTTAGATATTTGTCCCTCATGTAAATCACGCCCAGTCCCGTTGGCTGTTTGTTTGGTGCTTTGGTCCTCGTTAGCTCGGATATTGTCAGACCTGATCTGGCACACTATACTTCACTTTCGTCAACACATACCTGCCGGAGTGCTGTGTCATCGTTCATGGATAACAATGTAAAGACACGCGTGGTTCACACGCAACTGTAGTGTTGTCACCTCTAGCCGGTATAAGAGCCGCACAGATACAGTCAACCCCTGCACACCAGTCTGCTTCATATAACTAAAGTACCCTATACACGTACACTATGGCCCGCAACGTCCTGATTGTGTATGCGCACCAGAGTCCATGTTCCTTCAACGCCGCCCTGAAAGACGCCGCTGTGGAGGTCCTGCAGAAGCAGGGGTGTCAGGTGACTGTGTCTGACCTCTACTCCCTTAACTTCAAAGCCAGTGCCACTGCGGAGGATGTGATTGGAGAACTGAAGGACCCAGAGCACTTCCATTATGGGGAGGAGACCATGCTAGCCTGGCAGGAGGGCCACCTGAGTCCAGACATCATGGAGGAGCAGAAGAAAGTAAAGGCAGCTGATCTGATTATATTTCAGTTCCCCATGTACTGGTTCAGTGTTCCTGCCATTATGAAAGGCTGGATTGACCGGGTGCTCACACAGGGATTTGCCTTCACTTTCCAGGCAATGTACAACAATGGGATCTTCAAGGAAAAGAAGGCTATGCTTTCCTTTACTACAGGTGCAAGCCAATCCATGTACAGCCCTGCTGGTCTCAATGGGGATCTGAATGTGACACTGTGGCCATTACAGaatGGGGTTCTGCATTTCTGTGGCTTCCAGGTCCTGGCCCCGGAGATCTCTTACTCACCAGGATATTGCCCTCCTGAGGCCCGCACCCAAATACTGAACTCCTGGAGGAAGAGGCTGGAGGGGCTGTGGACAGAGAAGCCCCTGACCTTTACCCCCTGTGAGCTTTTCAACCTGTCCTTCCAGGGCGGCTTCATGCTCAAGGATGAGGTCCAGGCTGCCCAGGCTAAAAAGAAGTACGGCCTGACTGTTGGGCATCACTTGGGCAAACCCATCCCTCCGAACAACCAGATAAAGGCTGATGACTGAGACTGTCTGTACTGATAGCCAAACACACACTCAATGTTGTACTGtcagccaaacacacacacacactgttgtaCTGTAATTTTGTCTGGTGCATAACTGTAATTTAACCATGTGATTAAAAGTGGTGTAGAAATCA

Function

GO:

id name namespace
GO:0042221 response to chemical biological_process

KEGG:

id description
K00355 NQO1; NAD(P)H dehydrogenase (quinone)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020611 True 1382 mRNA 0.50 6 25920639 25932142

Neighbor

gene id symbol gene type direction distance location
AMCG00020616 NA coding upstream 35560 25877255 ~ 25885079 (+)
AMCG00020607 vps4a,LOC106939979 coding upstream 58907 25855088 ~ 25861732 (+)
AMCG00020606 sntb2 coding upstream 66075 25839704 ~ 25854564 (+)
AMCG00020608 sntb2,LOC106573669,LOC106560900 coding upstream 108964 25810166 ~ 25811675 (+)
AMCG00020609 snta1,LOC107560074,LOC107728410,LOC107667670,LOC107744389 coding upstream 137391 25782048 ~ 25783248 (+)
AMCG00020610 cotl1,LOC107684658,LOC107587015,LOC107559813,LOC107722478,LOC107738394 coding downstream 40391 25972533 ~ 25989687 (+)
AMCG00020617 NA coding downstream 84749 26016891 ~ 26029449 (+)
AMCG00020624 NA coding downstream 288488 26220630 ~ 26230564 (+)
AMCG00020626 NA coding downstream 495784 26427926 ~ 26428763 (+)
AMCG00020629 NA coding downstream 510233 26442375 ~ 26471185 (+)
G64457 NA non-coding upstream 25114 25894150 ~ 25895525 (+)
G64436 NA non-coding upstream 100857 25819391 ~ 25819782 (+)
G64406 NA non-coding upstream 192305 25721933 ~ 25728334 (+)
G64394 NA non-coding upstream 277265 25640593 ~ 25643374 (+)
G64378 NA non-coding upstream 348877 25569390 ~ 25571762 (+)
G64478 NA non-coding downstream 2763 25934905 ~ 25940113 (+)
G64555 NA non-coding downstream 263071 26195213 ~ 26197405 (+)
G64556 NA non-coding downstream 268922 26201064 ~ 26202040 (+)
G64557 NA non-coding downstream 275442 26207584 ~ 26207838 (+)
G64558 NA non-coding downstream 280738 26212880 ~ 26213093 (+)
AMCG00020603 NA other upstream 141657 25762135 ~ 25778982 (+)
G64372 NA other upstream 367319 25550911 ~ 25553320 (+)
AMCG00020585 NA other upstream 447753 25459096 ~ 25472886 (+)
AMCG00020573 NA other upstream 835766 25078142 ~ 25084873 (+)
AMCG00020572 NA other upstream 843949 25062373 ~ 25076690 (+)
AMCG00020621 LOC105904655 other downstream 123145 26055287 ~ 26096957 (+)
G64730 hsbp1,LOC102784925,LOC102222837,LOC103023435 other downstream 1483854 27415996 ~ 27418520 (+)
G64887 NA other downstream 2941488 28873630 ~ 28874072 (+)
G64908 NA other downstream 3076521 29008663 ~ 29009601 (+)
G64979 NA other downstream 3532422 29464564 ~ 29465712 (+)

Expression


Co-expression Network