AMCG00020766


Basic Information

Item Value
gene id AMCG00020766
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32520199 ~ 32528034 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020766
ATGAAGAAGCCACAGAAGTTGGCTGTGGTGGCTCCATGCTGCCTCTCCAGTCCTTCAGTGTTCTCTTCCCCCTTTGAAAAGTTGTACCCAAGCAAATTCTCCTCCCCCACAGTGACTGCCCTGCCTGTGAATGGAGTCTCCAGGAGGGCCCGGCTCAATGGAGGGGccCTGGCACCGCTGCAGCGACAGAGTGCTGCTGAGGACCTGCATGCTGCCCTGGAAGGCATCGATGCCATCCACAATGCCCTGTTCAACAACCTACTCTCCCAGCCGAGCAGACCGCCTGGAACTGGGGAGCATGGCATGGGTCATGGCTCCGGCATGGGTCAGGACGCTGAGGGTCACGGCTCCGGCATGGCGGCCACAGATGGCCCCTCCACTGGGACTGCCCAGAGCAACATTGCCCTGCTGGTGAACTGGCCCACAGGTAGCCCCTCCACTATGCCTGACCTGCTGGGGAATGGGCCCTCGGCCAGCCCCTCCACTGGGACTGCCCAGAGCAACGTTGCCCTGCTGGTGGACTGGCCCACAGGTAGCCCCTCCACTATGCCTGACCTGCTGGGGAATGGGCCCTTGGCCAGCCCCTCCACTATGACTGAGTCTCTAGTGCCTGGCAGGGCCCTGAATCCAACTGAAATGCAATCCACTGCTTCCGAGCCCCACACCACTGCTGTGCTGCCCCAGTCCACTGCGGGTGGCACCAAGCACTCCCGCTCTGCCCTGATGAGTGTCCACTATGGACACGCCCATGATCATCTCCAGCTGGCCTCCTTGAACAGCCTCTTCTGTGACTTTGAGATGGACCTGTGTGCCTGGACTCCATCAGGGATGGGCCACTCTGACTGGCTGCTGCACCGCGAGAGGCCAGATGCCTTCGAAGGTGCGGCGGTCACCGGGGAGGACGGCTGCCGCAACAAAGCAGGGCAGTACCTGTACATGGAGTCTTTATACCAGCACAGCCAGGGTTACACCGCAGAGCTGCGCAGCTGGGAGCTGACTGGCGCGGCCTGCCTGTCCTTCTGGTACAGTGTGTTCGGGGCTGGAGTGGactCCCTGTCAGTGTACCTGGTGTACTCGGAGAGCTCTCTGGACAGGCGGCTGGTCTGGTCTGACGGTGGCAAGGAGACCCGGCAGTGGTACCTGGAGACTCTGGATCTGGCAGTCACTGGGGCACAGAAATATCGGGTGGTGTTTATAGGTACTATTGGCAATGGTTGCAACGATGCTGTGCTGGATGATCTGGAGGTGTGGGGCCAGCCATGTGCCAGTGTGTCTAGATCCACCTCTAAGACTGCCATCACGACTCCTTCCATGACTGCCAATGGGGGTAACTTTAGTACCACTACTGCTTCTAGTTCTACCAATGGGGGTAACTTACCTGCCACAGAAAATGGAACTGCTTCAGTCACTGCCAACCTTGCCACCCTCCTGCCAACTACTGCCAGACTGGGTAATGCCACCTCTGCTCCCCCtggctctgtgctgctgtacTGCAGCTTTGAGTCCTCGCTATGCGGCTGGACCCAGTTCCAGGGTGATGACTTTGACTGGCGCCTGCACCGGGAGAGGGAGCTGACGGCAGGGGTGCGCGAGAGCGGGGCAGGCTGCAGAAACCTGGGAGGATGGTACCTGTACATTGAAGTGATCTCCCACAGGAAGACTGGTGATCGGGCAGTGCTGGTGAGCCCCCCCCTCAGTGGCTCAGTGTGCCTGAGCTTCTGGTACAGCCTGCTGGGCCAAGGAGTGGACTCCCtcagtgtgtatgtgctgtTCTCGGACACGCCTGAGCTCCAGTACAGGTTGTGGGAGAGGCAGGGCTCCAGTGCCCGGCTGTGGGCCAGAGCAGAGGTGCCGCTGATTGTGGAGCTGGACAGGAGCTTCCAGCTGGTGCTGGAAGGACTGCTGGGGGAGCAGCCCTGTGGTGACGCGGCCCTGGATGAGCTCATGGTTGTGAGGGGCCACTGTGGGGGGGCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020766 True 1977 mRNA 0.61 10 32520199 32528034

Neighbor

gene id symbol gene type direction distance location
AMCG00020759 NA coding upstream 65366 32450177 ~ 32454833 (+)
AMCG00020755 NA coding upstream 157537 32357858 ~ 32362662 (+)
AMCG00020756 NA coding upstream 164370 32346662 ~ 32355829 (+)
AMCG00020754 NA coding upstream 205817 32310490 ~ 32314382 (+)
AMCG00020749 NA coding upstream 230860 32281581 ~ 32289339 (+)
AMCG00020770 NA coding downstream 12905 32540939 ~ 32551381 (+)
AMCG00020771 NA coding downstream 77737 32605771 ~ 32608552 (+)
AMCG00020772 NA coding downstream 123698 32651732 ~ 32656484 (+)
AMCG00020782 NA coding downstream 239298 32767332 ~ 32770643 (+)
AMCG00020786 ftsj1,LOC107589293,LOC107706451,LOC107708504,LOC107703563,LOC107591736 coding downstream 283259 32811293 ~ 32824902 (+)
G65534 NA non-coding upstream 75555 32443881 ~ 32444644 (+)
G65503 NA non-coding upstream 212480 32307438 ~ 32307719 (+)
G65452 LOC106568273,LOC106562702,LOC104948043,LOC105031130,LOC102213975 non-coding upstream 250742 32268626 ~ 32269457 (+)
G65437 vdac3,LOC107671013,LOC107559564,LOC107754399 non-coding upstream 251998 32182362 ~ 32268201 (+)
G65579 NA non-coding downstream 35396 32563430 ~ 32585714 (+)
G65594 NA non-coding downstream 101689 32629723 ~ 32686320 (+)
G65670 NA non-coding downstream 351065 32879099 ~ 32882118 (+)
G65829 NA non-coding downstream 1521960 34049994 ~ 34051037 (+)
G65831 NA non-coding downstream 1534118 34062152 ~ 34062595 (+)
AMCG00020748 NA other upstream 239364 32274286 ~ 32280835 (+)
G65433 LOC106580491,LOC108439670,LOC103398109 other upstream 330818 32186614 ~ 32189381 (+)
AMCG00020742 NA other upstream 425013 32094024 ~ 32095186 (+)
G65343 NA other upstream 655493 31863383 ~ 31864706 (+)
AMCG00020715 gas8 other upstream 1035729 31459502 ~ 31484470 (+)
G65590 NA other downstream 64448 32592482 ~ 32594454 (+)
AMCG00020783 dock5,LOC106585561 other downstream 179899 32707933 ~ 32744735 (+)
G65691 NA other downstream 418697 32946731 ~ 32989445 (+)
G65705 NA other downstream 579839 33107873 ~ 33108426 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other downstream 1426772 33954806 ~ 33960582 (+)

Expression


Co-expression Network