G65579


Basic Information

Item Value
gene id G65579
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32563430 ~ 32585714 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU81997
gcacacacacacacacacacacacacacacacacacacacacacacacacacacacactctattaTTGCACGAAAAACACGTCACAGTATTCAGAACACCTTCACTGATGTGGCATTAACCACCAGCTCTGATCTCAGTCGTTATAGCATCGTCTTCGACATCTTCACATGCACTGGAGAACTTCAGAACCACCAGAGTCAGAGAGGTCAAGGGTCACCAGCCCCAAACtgagtacagtatattacagtacaggTCAGACTGCCATAAAAAAGCAGTTgtctttacaaataataaaaatatatagaaaaaggGACAGATCTGAGTTTGACAGAGACTCCAACTCCTCCCAGTGCATCCCCCGCAGTAGGCAGTACAGTGGGGGGTGGAGGTCTCTAGCGCACCGACAGGTTCTTCTCTCGCTTCTTGAACACAGAGCCCAGGCCCTGGCGGGTGCCCAGCTCGGCAGTGTCTAGCGTGTCTCTCCtgcccagacagacagcacaGTGTATCAGCGTGTCAATTAGactcaattattcaatttaaggtgctttattggcaggacTTACAATTAGCAGTGTTGCCAAATCAAttatacactacacacacagggtaatataatatttcacaGACAATGTTTTGATTCTCCCTCTCACCGGCTCAGTTCAGCGGCGGCTCTCTTGCGCTCATCCTTCTTCTCCGATCTCCTCCTCAGACGGTACACCAGCCCTCTCACCCCGCCACGCTGCTTTCTGTCC

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81997 True 756 lncRNA 0.49 2 32563430 32585714

Neighbor

gene id symbol gene type direction distance location
AMCG00020770 NA coding upstream 12049 32540939 ~ 32551381 (+)
AMCG00020766 NA coding upstream 35396 32520199 ~ 32528034 (+)
AMCG00020759 NA coding upstream 108597 32450177 ~ 32454833 (+)
AMCG00020755 NA coding upstream 200768 32357858 ~ 32362662 (+)
AMCG00020756 NA coding upstream 207601 32346662 ~ 32355829 (+)
AMCG00020771 NA coding downstream 20057 32605771 ~ 32608552 (+)
AMCG00020772 NA coding downstream 66018 32651732 ~ 32656484 (+)
AMCG00020782 NA coding downstream 181618 32767332 ~ 32770643 (+)
AMCG00020786 ftsj1,LOC107589293,LOC107706451,LOC107708504,LOC107703563,LOC107591736 coding downstream 225579 32811293 ~ 32824902 (+)
AMCG00020789 NA coding downstream 331906 32917620 ~ 32923763 (+)
G65534 NA non-coding upstream 118786 32443881 ~ 32444644 (+)
G65503 NA non-coding upstream 255711 32307438 ~ 32307719 (+)
G65452 LOC106568273,LOC106562702,LOC104948043,LOC105031130,LOC102213975 non-coding upstream 293973 32268626 ~ 32269457 (+)
G65437 vdac3,LOC107671013,LOC107559564,LOC107754399 non-coding upstream 295229 32182362 ~ 32268201 (+)
G65450 NA non-coding upstream 309569 32234150 ~ 32253861 (+)
G65594 NA non-coding downstream 44009 32629723 ~ 32686320 (+)
G65670 NA non-coding downstream 293385 32879099 ~ 32882118 (+)
G65829 NA non-coding downstream 1464280 34049994 ~ 34051037 (+)
G65831 NA non-coding downstream 1476438 34062152 ~ 34062595 (+)
G65873 NA non-coding downstream 1636632 34222346 ~ 34261929 (+)
AMCG00020748 NA other upstream 282595 32274286 ~ 32280835 (+)
G65433 LOC106580491,LOC108439670,LOC103398109 other upstream 374049 32186614 ~ 32189381 (+)
AMCG00020742 NA other upstream 468244 32094024 ~ 32095186 (+)
G65343 NA other upstream 698724 31863383 ~ 31864706 (+)
AMCG00020715 gas8 other upstream 1078960 31459502 ~ 31484470 (+)
G65590 NA other downstream 6768 32592482 ~ 32594454 (+)
AMCG00020783 dock5,LOC106585561 other downstream 122219 32707933 ~ 32744735 (+)
G65691 NA other downstream 361017 32946731 ~ 32989445 (+)
G65705 NA other downstream 522159 33107873 ~ 33108426 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other downstream 1369092 33954806 ~ 33960582 (+)

Expression


Co-expression Network