AMCG00020783 (dock5,LOC106585561)


Basic Information

Item Value
gene id AMCG00020783
gene name dock5,LOC106585561
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32707933 ~ 32744735 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020783
ATCATGGCGGAACTGTAGTGTCCCGGACGAGAAAGTTATGCCCTCCGCCCGGagtttgttcatgtatttatttatttattacccgTAATCCCGCGTTTTCCCTAAAATGACTCGCTGGATACCCACGAAGAAGGAGAAGTACGGCGTGGtgatCTACAACTATGATGCTAAGGAGGAGCACGAGCTCAGCCTGCAGGTGGGAGATGCTGTTCACATCCTGGAGACCTTTGAAGggTGGTACAGAGGCTACACACTGCGAGACAAATCACGGAAGGGTATCTTCCCAGCTTCCTACATCCACCTGAAGGAGGCGCAGGTAGAAGGAACAGGgcAGCAGGAAATAGTCATCCCCACTGATCAGCCCCTGGTGCAGGAGCTGGGCGCCACCCTGAGAGAATGGGCACAGATCTGGCACAAGCTCTACGTGAACAACAAGACCACACAGTTCCGCCACGTGCAGCAGATGACCTACAGCCTGATCGAGTATCGCTCCCAGATTGTGTCGGGGACGCTGCCCAAAGATGACCTGGTGGAGCTGAAGAAGAAAGTGACGGCCAAGATCGACTATGGCAACCGGATTTTGGACCTGGACCTGGTGGTGCGGGACGAGGGGGGGAACACACTGGACCcggacagcagcagcaccatCAGCCTGTTCCGCGCTCACGAGACGGCCTCCCGCTGCATTGATGAGCGCATCCAGGAGGAGAAGACTCGGCTGCAGAACCTGGAGAGGAGCCGCCAGTCCCTGTTCAGCACGGTTCACACGTACAGCCTCTTCATGAACCTCAAGAACTTCGTCTGCAACATCGGGGAGGATGCCGAGCTGCTCATGTCCCTGTACGACCCCGACCAGTCCGAGTTCAtcagCGAGAACTTTCTGGTACGCTGGGACAGCAAGGGGATGCCCAAGGAGATTGAGAGGCTAAATAACCTGCCAGCGCTGTTCACGGACCTGAGCAGCAGTGACCTGATCCGACCTCGCTTGTTCCTGGTGTGTCAGATCATCCGGGTGGGCTGCATGGAGTTGAAGGAGGGCAAGAAACACACGGGGGGGTTGCGACGCCCCTTCGGAGTGGCAGTGATGGACGTCACGGACATCGCTCACGGGAAAGTGGACGACGAAGACAAGCAGCATTTCATCCCATTCCAGCAgATCGCCATGGAGACATACATCCGTCAGAGGCAACTGATCATGTCTCCGCTGATCCCCTCGCGGGTGATCGGGGAGAACGAGCCCCTGACCTCTGTCTTCAACAAGGTCATCGCCAGCAGAGAGGTCAACCACAAAGGTCAAGGACTGTTTGTCACTCTGAAGCTGCTTCCGGGGGATCTCTCTCAGGTCAAGAAAGATTACCCCCACTTTGTGGATCGGACCACTGCCATTGTGAGGAAAATGGGCTTCCCCGAAATCATTCTCCCAGGGAATGTGCGCAACGACATCTATGTGACGCTGCTGCAGGGCGAGTTCGACCGGGGCAAGAAGAAGACGCCCAAGAATGTGGAGGTGACGATGAGCGTGCTGGACGAGGACGGGACGCCGATGGAGAAAGCTATATTCCCTGGAGCCGGCTACGATGGCATCACAGAGTACAAGTCTGTCATTTACTACCAGGTCAAGCAGCCCTGCTGGAACGAGACGGTCAAGgtggcAATTCCCATTGAAGATGTGGGTCGCTGTCACCTCCAGCTGATGTTCCGGCACCGCTCCTCGCAGGACTCCAGGGACAAGTCGGAAAAGCCGTTTGGAATGGCGTTCGTCAGGCTGATGAAACCCGATGGCACCACCCTGCGAGACGGGAAGCACGACCTCATCGTTTACAAGGGAGATGTTAAGAAGGCGGAGGATGCACGGGCGTATCTGAGCATGCCCAGCACGTGGACTGaggtggaggagaaggagaggcagTCTGGGAAGCAGTTCCATCACTCCGGCACCGTCCCCATCACCAAGGACAGCTTCCAGATCGCCACGCTCACCTGCTCCACCAAGCTCACTCAGAACGTGGACCTGCTGGGGCTCCTGAACTGGCGCTCGAACCCTGAGCAGCTGGAGCAGACCCTGGGCAGGTTGATGGAGGTGGAGGGGAGCGAGATCGTAAAGTTCCTGCAGGACACTCTGGATGCCCTCTTCAACATTATGATGGTGACGTCAGAGAAGGAGACCTATGACAAGCCAGTCTTCAATGCCCTGgtgttCATCATCACGCTCATAGGAGACATCAAGTTCCAGCACTTCAACCCTGTGCTGGAGACGTACATCACCAAGCACTTCAGCGCTACGCTGGCCTTTTCGAAGCTGACCAAGGTGCTGAATTTCTACGTGGGGAACGCGGAGGACACCAGCCTGACGGAGCTGCTGTACTCGGCCCTGAAAGCCATGAAGTATCTCTTCCGCTTCATCGTGCAGTCCCGTGTGCTCTACCTCAGGTTTTATGGGAACAACGAGGATGGGGACGAGTTTCTTAACTCCATTCGGATGCTCTTCCTATCTTTCAACACACTGATGGACCGACCGCTGGACGAGGGGGTGAAAATCAAAGGCGCCATTCTGAAATACATCCCCACCATCATCAACGATGTCCAGCTGGTGTTTGACGTGGTGGAGCTCAGCGTACTCCTGACCAAGTTCATCGAGAGTATCCCTGATGCCCAGTTGGTCCGTCAGAAGCTAGGCTGTATGTGTAAGATAGTGGAGAGTGACCTCTTTCGCCAGCCAGAGTGTCGGGACATCCTGCTCCCACTGATGACTGACCAGCTGAGCGGTCAGCTGGACGACTACTCCAACAAGCCGGACTACGAGGCCTGCGCCCAGCTGCTCAGCACCGTGTTGGACATGCTGGACAGGAAGGATGTGGGTCCCACCAGGAGTCACATCCAGTTGATTATGGAGCGCCTCCTCCGCAGGGTGAATCGCACCGTCATCAGCATGAACCGCAACTCCCCCCTCATTGGTCACTACTTGGCATGCATGACAGCACTCCTGAAACAGATGGACGACAGTCACTACACTCACTACATCAGCACCTTCAAGACTCGACAGGACATTATCGATTTCCTGATGGAGACATTCATCATGTTTAAAGATCTGATCGGGAATGTCTTCCCCAGTGACTGGATGATCATGAACCTCCTTCAGATCAGaGTGTTTCTACGAGCAATCAACCAATACTCTGAAGTCCTCAATAAATATTTCCTGGACCAGGCTCATTTTCAGCTGCagCTCTGGAACAACTACTTCCACCTCACCGTGGCCTTCCTCACTCACAGATCCCTGCAGCTAGAGACCTTCTCTCTGGAGAAACGCACCAAGATCCTCAACAAATATGGAGACATGAGGAAGGAAATCGGCTTCAAGATTCGAGACATGTGGTACAACCTGGGCCCGCACAAGATGAAGTTTATCCCGTCCATGGTGGGGCCCATCCTGGAGGTGACGCTGGTCCCAGAGCCCGACCTGAGGAAAGCCACCATCCCCATCTTCTTTGACATGATGCAGTGTGAGCACAACTTCAGCCACAACCACACCTTCCACATGTTCGAGAATGAACTCATCACCAAGCTGGATCAAGAGGTGGAAGGCGGCCGAGGGGACAAGCAGTACAAGTTCTTGCTAGAGAAGACGCTGCTGGAGCACTGTCGCAGACACCGCTACCTCTCCCAGTCGGGGGAGGCCCTGGCTCTCCTGCTCAGCAGCCTCTTGGAGAACCTGCTGGCCTATAGCACCATCACCCATGACGAAAGCCCCGAGCATCGCATGAGCTGCACTGTCAATGTGCTGAACTTCTAcaaggagaagaagagagaggataTCTATATTAGGTACCTGTACAAGCTTCGAGATCTGCACCTGGACTGCGAGAACTTCACAGAGGCGTCCTACACCCTCCTGCTGCACGCTGAGCTTCTGGAGTGGTCCGACAAGCCCTGCCTCTCCCACCTCATCCCACGGGCTGGCTCTCAGGTGTCCTCCCAGCAGGAGCTGAAGGAGAAACTGTTCCAGGAAATCATCAGCTATCTGGACAAGGGGAAGATGTGGGAGAAGGCCATTGAGTTGAGTAAGGAGCTCGCTGGGATGTATGAGAATCAGATCTTTGACTTCATGGAGCTCAGCCAGCTGCTGAAGCAGCAGGCCCGATTCTACGAGAACATCATGCACGCCATGCGCCCACAGCCCGAGTACTTTGCGGTGGGATACTACGGCCAAGGCTTCCCCTCCTTCCTCCGGAATAAGGTCTTCATCCACCGGGGTAAAGAGTACGAGTGGCTTGAGGACTTCAGCCAGAAGCTGCTGTCCCAGTTCCCCATGGCAGTGAGGATGACCAGCACAGCACCCCCTGACATCCAGAGTTTCACTGTCAAGCCGGTGCTCAGCCTTCCACCGCGATTCAAGGACAAAGGAGTGCCAGAGCAGATACTGAACTATTACAGAACCAATGAGGTGGACCAGTTCCAATACTCGCGGCCCTTCAGGAAAGGGGAAAAGAACCCAGACAACGAGTTTGCAACCATGTGGATCGAGAGGACCACCTACATCACCGCTTACAAGTTCCCCGGCATCCTGAAGTGGTTTGAAGTGAAGTCCGTCTCTGTTGAGGAGATAAGTCCTCTGCAGAACGCGATAGAGACGATGGAGATGGCCAACGAGAAGCTGAGTAACCTGGTGCAGCAGCAGGCCTGCGACCGAGCCCTGTCTGTCCACCCACTGTCCATGATGCTCAACGGCATCATCCCGCTGCTGGCTGATGGGATTCGGATTCACGGGGAGAAATCCACCGAGCAGCTGAAGCCGCTGCACAACCACCTGGTCACCTGCTTCCAGGAGCTGAGGGAGAAAGTGGAGAAACACTATGGGGTCATTACTCTGccctGCTCTCTGACCGAGAGGAAGAAGAGCCGTGTGGGCTCGGCAGTGATGCCGTACATCATGTCGTCCACACTACGCCGCATGTCCACCGTGTCCACTCTGTCCTCTGTCTCCTCGGGGCTCAGCAGCAGCTCCGGCTCGTCTGACGGCACCCCCTCCCGGCCGTGCTCCCAGGActctctgCTGTCCCAAGGGAATGAccgcagaacctctgtcctgtCTCGCTCAGAGGAGGACAACCGGATAGGCCGCAAAAATCGGAAGGAGTGGAGTGTTAGCAAATCCCAGGTCCTGGTGGAGAGGCAGGCGGACACTGACGAGACACCCCCTGAGAGACCCCAGAGACCCAAGAGTCTGCAGTTTGGTGACCGGCGCCTCACCCTGTCTCTGTTCCAGGGGGCATCATCACAACTCAACCTGGCCAACCCCCTcagccccctcccctcctccccccacacGCCCCGCAGCTCCAGTTTCACTTCCCTCCAGAGCGATGGGGAGGTGACCTCTGACATCCCGGGCACGCCTCCGCCCATGCCACCAAAAAGACACCCTCTGGACAGCGACAGTCCACGGAACTCGGTGGAGGTAGGCTGA
>TU82043
CTGCAATCAGATTTTTTGGTTTCACTTCCCTCCAGAGCGATGGGGAGGTGACCTCTGACATCCCGGGCACGCCTCCGCCCATGCCACCAAAAAGACACCCTCTGGACAGCGACAGTCCACGGAACTCGGTGGAGTTCGTTCCCCGGTTGCCGACCAAAGGGGACCACAGACCCCCCCCACCGCCTCCCAAGGCCAGGAAGTCTGTGATCCCGTCGTTCGAGCACAGCCCACAGTGACGGGTCAGCCTCTGTCAGGACAGCGGCTGCGTCAGGATGAGAGCAGAGGGTGATAGTGGAGCAGCACCAAACCCCAAACCCCCAACCCAATGCCATTCCTTTCGCTCATCACCCCCAAAGTCGAGGTTAAGGAGAagagaaggggggtggggggttggcgTCCTTATTAGGGGAGGACACACCTTCAAAATGCAGCCCTGGAAGACGATCTGCCGGAGAATCGGACTGGGTCCAGTTTAGAAACCCAGCAGGTCCAccatttcagtttgtattttctgttgatTCCCCAGTTTAATcactttcaaaagaaaaaaataaggcaaTTATTGACTGTCCCGAGACAGTGTCAGATAAGTAATGAAATGCAtcctgtatatatactgtactatacataGATAGGTTAAATACTGGGcaaagtcttttttttgtaaGCTCTTTGGCTTTCAGTATTCCGGAATGAATTGTCTGAGCTGAGTATTCCGTATCTGTCCGGAACAAAACTCAATGGAATATCTACCTGACCTGTTTTACAAAAAGCCTGGAGGGACGTGGAAATTTGCAGAACTACTGTagaatatgtgttttaaatactgtCAGAGGATCCCAGACACAGCAAAAATGTGGGccacaaagaacaaaaacaaaacaaaaaacagggcAAACCAGGACACAAACAATTTGAAACTTTGACCCATAAGCGAATTCCAAGCCCACTGCTCGAGGGTGGGTTTCCATTATTGAAGTACAAACAGAAAGCCGCAGTGGATGGGTCGAGCTTTTGATTTGAATCCGGGGCCAAACCTTTCTTTCAAGAGTTGGAATTCAAGGCCCACTGCAGGCTGTCACTGTGGAGAGCAACGCAATACATTCTCGTGTGCAATATGCTGTATCTGTCAGATTTAAACTGCAGTCGAACAGATTTGGAGCTGAGAGGCATAAAAACATGGAGAAAAGTGAAATAGTGTGAAGTGGCATTTCTGTGGTTTGACCCTTATAACCCAGCATGGTGTATGTGTCACCTGCAGAGGCCTGGCAGTTTTGGATCATCTATTTGTGCCAAGCCTGTTTTTAATGtaggcaatatatatatgtgtcatGCTGGGTTCTTAGGAGTTAATCACACAATTCTAGGCTTCAGCTACACGTATGGTAAAACAGTAAGACGATAGTGGATTTGTGACGTAATGGAAGGCACTTTACTTTCCTACTCGAGAAACTTACCACGAGATACATTTTCTGGAGGGAGAGGGTCAGTAAATCACactaaaatgttatttgaattGGTTCTCTATTGCGATACTGCTTAAGTGCTTTAATTACCTCATTCATTAAACACAGATAATCAAGACATGCACTGGAtttcataaatgtaaatgtgattttatttttgtgtttttaaggagaagaaaatatatatgtacagaatTACTACTTTGtatgtgcgtgcatgtgtgtatgtatgtgtgcgaGCGCAAGTGTTTTTGTCTCTGTGGTGCCAGTGTCAGAGCCCCTTGGATGCAAGGTGTCTCCTGTCAATCACTGTAAAACTGTTCGCTTCAGACTTGAGAATCATTTCCAAGAATGCAGcatctccttttatttttatgattttatttgaaatgtttacagCTCTGCGTTCTTCATCACCGCACTGCAGACCAAGGAACACGAGAGAGCAAGCAATCTCTTGCAATTGGTCGGACGTCAACAGACAAATCAAAGACACAGAGACCACGATAAAAGACTGAACCACAAAAAATCCTGCTATTTATAGAAGGGATTGGGCGaggcgttttgtttttgttttgttcggtTTTCTTTGCTCTTTTGCTTTAACTGTATGCACCTGTGCCGTTGTTTCAGTGTGGTTAGACACTGCAGATGGGCTTTGTAGTGCGTTCTTGGGAGTTTTTTAGCTAAAGGGACCAAAATTAACCAAACCCTCCTGCAGggattctttttgtttttaccatggtgacagaaaacagaaatatggTACTGTGAGGACAGAGGATTCACTTCCTGCTTTGGGAAAACCATGTCAAACACTGAatactttcattattattattatttttttttttttcttaactgtcaaactatcaataataaaataatttaaca

Function

symbol description
dock5 Predicted to enable guanyl-nucleotide exchange factor activity. Acts upstream of or within myoblast fusion. Predicted to be located in cytoplasm. Orthologous to human DOCK5 (dedicator of cytokinesis 5).

NR:

description
PREDICTED: dedicator of cytokinesis protein 5 isoform X1

GO:

id name namespace
GO:0007520 myoblast fusion biological_process
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0043087 regulation of GTPase activity biological_process
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function

KEGG:

id description
K17707 DOCK5; dedicator of cytokinesis protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020783 True 5464 mRNA 0.56 50 32707933 32742239
TU82043 False 2360 lncRNA 0.43 3 32741200 32744735

Neighbor

gene id symbol gene type direction distance location
AMCG00020772 NA coding upstream 51449 32651732 ~ 32656484 (+)
AMCG00020771 NA coding upstream 99381 32605771 ~ 32608552 (+)
AMCG00020770 NA coding upstream 156552 32540939 ~ 32551381 (+)
AMCG00020766 NA coding upstream 179899 32520199 ~ 32528034 (+)
AMCG00020759 NA coding upstream 253100 32450177 ~ 32454833 (+)
AMCG00020782 NA coding downstream 22597 32767332 ~ 32770643 (+)
AMCG00020786 ftsj1,LOC107589293,LOC107706451,LOC107708504,LOC107703563,LOC107591736 coding downstream 66558 32811293 ~ 32824902 (+)
AMCG00020789 NA coding downstream 172885 32917620 ~ 32923763 (+)
AMCG00020791 NA coding downstream 418680 33163415 ~ 33179686 (+)
AMCG00020793 LOC108413329,LOC107552197,LOC107671041 coding downstream 911891 33656626 ~ 33660550 (+)
G65594 NA non-coding upstream 21613 32629723 ~ 32686320 (+)
G65579 NA non-coding upstream 122219 32563430 ~ 32585714 (+)
G65534 NA non-coding upstream 263289 32443881 ~ 32444644 (+)
G65503 NA non-coding upstream 400214 32307438 ~ 32307719 (+)
G65452 LOC106568273,LOC106562702,LOC104948043,LOC105031130,LOC102213975 non-coding upstream 438476 32268626 ~ 32269457 (+)
G65670 NA non-coding downstream 134364 32879099 ~ 32882118 (+)
G65829 NA non-coding downstream 1305259 34049994 ~ 34051037 (+)
G65831 NA non-coding downstream 1317417 34062152 ~ 34062595 (+)
G65873 NA non-coding downstream 1477611 34222346 ~ 34261929 (+)
G65877 NA non-coding downstream 1495154 34239889 ~ 34267100 (+)
G65590 NA other upstream 113479 32592482 ~ 32594454 (+)
AMCG00020748 NA other upstream 427098 32274286 ~ 32280835 (+)
G65433 LOC106580491,LOC108439670,LOC103398109 other upstream 518552 32186614 ~ 32189381 (+)
AMCG00020742 NA other upstream 612747 32094024 ~ 32095186 (+)
G65343 NA other upstream 843227 31863383 ~ 31864706 (+)
G65691 NA other downstream 201996 32946731 ~ 32989445 (+)
G65705 NA other downstream 363138 33107873 ~ 33108426 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other downstream 1210071 33954806 ~ 33960582 (+)
G65830 tet3,LOC106906237 other downstream 1314376 34059111 ~ 34059465 (+)
AMCG00020820 NA other downstream 1659799 34404534 ~ 34411620 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000010_10894958_10954990 DOCK5 coding CI01000010 null 10894917 ~ 10954990 (-)