CI01000010_10894958_10954990 (DOCK5)


Basic Information

Item Value
gene id CI01000010_10894958_10954990
gene name DOCK5
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 10894917 ~ 10954990 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_10894958_10954990.mRNA
GGTGGTACCGAGGATACACACTACGACAGAAATCACAAAAGGGCATTTTCCCTGCCAACTATATTCATCTGAAAGAAGCCAAAGTTGAGGGAACGGGCAACACATTTGGCAAGAAAAATAGTCTGAATCTCCCAGCATGCCAAAGTTACACAACATGGTCATTGCTGACACAATTGCTGACTGTTTTGGACCAAATTGAACAATCTTCTAAGAAACAAGAGACTGTCGTACCTACAGATTTGCCCTTGGTCCATGAAATTGGCACCACTCTACGAGAATGGACACAAATATGGCACAAGCTTTACGTGAGCAACAAGACCACGCTGTTCCGGAACGTTCAGCAGATGGCCTACAGTCTGATCGAGTACCGCTCGCAGATTGTGTCCGGCACGCTTCCCAACGACGACCTTGTGGAGCTGAGGAAGAAAGTCACAGCGAAAATCGACTATGGGAACAGGATTCTGGGTCTTGATTTAGTGGTGCGTGATGAAGCCGGAAACACATTAGACCCCGAATGCACCAGCACTGTCAGTCTGTTCAGGGCTCATGAGTCAGCATCCCTCAGTATTGATGAGAGGATACAGGAGGAGAAGATGCGGCTTCAGAACCTGGAGAAGCGGCGTCAGGCCCTCTTCAGCGGCGTGCATACGTACAGCCTCCTAATGAATCTCAAAAACTTTGTATGCAACATCGGCGAGGACGCAGAACTCTTCATGTCATTATATGATCCAGACAAGTCTGAATTTATTAGTGAAAACTTCCTGGTGCGGTGGGACAGCACAGGCATGCCGAAAGAGATTGAAAAACTCAACAACCTTCCTGCACTTTTCACGGACCTGAGCAGCAGTGACCTCATCAGACAGCGACTCTTCCTGGTGTGTCAGATCATCCGTGTGGGCTGCATGGAGCTAAAGGACGGAAAGAAACACACAGGAGGGCTGAGGAGGCCGTTTGGAGTAGCAGTCATGGATATCACAGATATTGCCCATGGGAAAATTGATGATGATGATAAGCAGTATTTCATCCCTTTTCAACAGATTGCCATGGAAACATACATCCGTCAGAGGCAACTAATCATGTCTCCTCTCATCCCGTCTCGTGTCATTGGCGAGAATGAGCCACTCGCTGCCGTCTTCAACAAGGTCATCGCAACGCGAGAGGTTAACCACAAAGGACAGGGTTTGTTTGTGACCCTAAAGCTGCTCCCGGGAGACGTGTTCCAGGTTAAAAAAGATTACCCTCATTTTGTGGATCGCACAACAGCTATAGTCAGGAAAATGGGCTTTCCTGAAATTATCCTGCCAGGCTATGTAAGGAATGATATATATGTTACACTGCTACAAGGAGAATTTGATCGTGGCAAGAAGAAAACTCCCAAAAACGTAGAAGTTATAATGAGCGTGTTGGATGAAGAAGGAAATCCCATGGAGAAAGCCGTATTTCCTGGAGCTGGTTATGAAGGGATCACTGAATACAAGTCTGTCATCTACTATCAAGTCAAGCAGCCCTGCTGGAATGAGACGGTTAAGGTGGCCATTCCTATTGAGGACGTATGTCGATGTCACCTGAGGCTGACCTTTAGACACCGATCTTCTCAAGATTCCAGAGATAAGTCCGAGAAGCCTTTTGGCATGGCATTTGTCCGCCTGATGAAGTCGGATGGCACCACGCTCCCAGATGGAAAACACGATCTCATTGTCTACAAGGTGGATGTGAAGAAAGCTGACGATGCCAAGACGTATTTGACTCTGCCTGGCACATATGCTGAAGTGGAAGAGAAGGAGAGACAGACGGGAAAATCCTTCCATCATGCCGGCCTCATTCCCATCACCAAAGACAGCTTCCAGATCGCCACCCTCACCTGCTCTACAAAGCTTACTCAAAACGTTGACCTTCTGGGGCTTCTCAACTGGAGATCAAACACTGAGAGACTTGAAGAAATTCTTCAGAAACTTATGGAAGTGGATGGAGGGGAGATTATTAAAGACACACTGGATGCTCTCTTTAATATCATGATGGAGACCTCAGAGGAAGAAACCTACGATACACTGGTTTTCAATGCCTTGGCAAGTTTTGATTATTTAACTCACTCTTCAGAGATCCACTCGTTTCCAAACTATGCTTCTGTTTTGGAAAAGAGTGCTCGACCAATTCTGCCGAGTCATTGCGTTACTCGTACCCTTAACGCCATAACGTGCCATATAGCCATCTGCATGTGGGATGTCTTCCCCCTCACAGACATACAGGTTTTCATCATCTCATTGATTGGCGACATAAAGTTTCAGCATTTCAACCCTGTTTTGGAGACCTACATTAGCAAACACTTCAGCGCTACTCTGGCATATCAGAAGTTGACCAAAGTGTTGAATTATTTTGTGGGCCATGCCGAGAACCCGGCTCATACAGAGCGGCTGTACGCCGCCTTGAAAGCCTTCAAGTATCTTTTTCGCTTTATTGTGCAGTCTCGAATTCTCTATCTGAGGTTTTATGGGAAAAGTGAAGATGCAGGGCAGTTTCTCGACTCCATTCGGACCTTATTTCTTTCAATCAGCAATCTGATGGACAGACCTCTGGATGAAGGAGTTAAGATAAAGGCAGACTGCAGAGATGTTTTGTTGCCCCTGATCACAGATCAGCTGAGTGGACAACTGGACGATCACTCCAACAAACCTGATCTTGAGGCCTGTGTACAGCTGCTGAGCACTGTACTGGACATGCTGGACTGCAAAAACGTGGGTCCCACGTCCGGTCATGTGAAGTTAATTGTGGACCGTCTCTTGCGGAGGGTCAACCGTACGGTCATCAACCTGAGCTTGGACTCTCCCTTCATAGGCCAATACCTGGCATGCATGACCGCTATCCTGAAACAAATGGAAGACGCACATTACGCACAATACATCAGCACCTTCAAAACCAGACAGGACATTATCGATTTTCTAATGGAGACTTTCATCATGTTCAAAAACCTGATGGGCAACGTGTTTCCACCCGACTGGATGATCATGAATCTTCTCCAAATGAAAGTCTTTCTGCGGGCGATAGACCAGTACTCTGATGTTCTCAACAAGTACTTCCTGGAGTCCGCTCACTTCCACTTACAGCTTTGGACCAGCTACTTTCACCTGATTGTTGCCTTCCTTACACACAAGTCCTTGCAGCTGGAGTCCTTCTCGCTTGAGAAACGAGACAAGATTCTCAACAAGTACGGAGACATGCGGAAAAGCATCGGCTTTAAGCTGGGACATATGTGGCAGAATCTTGGATCAGAGAAGTTGAAGTTCATCCCCGCAATGGTGGGGCCGATCCTGGAAGCCACGTTAGTGCCTGAGCCTGACCTGAGGAAAGCCACCATCCCCATCTTCTTTGACATGATGCAGTGTGAACACCATTTTAGCAACAACCACACCTTTCAGAAGTTTGAGAATGAGCTAATCACAAAACTGGACCAGGAAGTTGAAGGAGGCCGCGGTGATGAACAGTACAAGATTTTACTGGAAAAAATACTGTTGGAACGCTGTCAGCGGCATCTGTATCTGAGTCAGTCTGGTAAGGAGTTGGCTCTGCTCTTGAGTAGCCTACTGGAGAACCTGCTGGCCTACCGCACCATCACCCACGACGAGAGCCCTGAGCTCCGCATGAGCTGCACTGTCAACGTCCTGAACTTTTACAAAGAAAAGAAAAGGGAGGATATTTATATCCGATATTTGTACAAGTTACGTGATCTACATCTGGCCTGCGAGAATTACACAGAGGCTGCCTACACCCTGCTGCTGCATGCTGAACTGTTGGAGTGGTCCGACAAGCCGTGCGCGCCCCACCTGATCCCACGGGACGGAGCTCAGGGCTGGACGCAACAAGAGCTAAAGGAAAGACTTTTTCAGGAAATCATGTGCAATCTGGACAAAGGCAAAATGTGGGAGAAGGCCATTGAGATGGCCAAACAGCTTGTTAAACTTCACGAAAACCAAATGTTTGATTTCATAGAGCTCAGTCAACTGCTGAAACAGCAGGCACAGTATTATGAGAACATCATGCACGCTATGAGACCTCAGCCTGAGTATTTCGCAGTGGGATACTACGGTCAGGGTTTCCCGTCCTTCCTCAGGAATAAAATGTTCATTTACCGTGGTAAAGAGTATGAGTGGCTGGAGGACTTTAGCCTCAAGCTGATGTCTCAGTTTCCCAATGCAGTGAAGATGACCAGCACATCGCCCCCTGATATTCAGTGTTTTACAGTGAAGCCTGTCCTAAACTTACCTTCACAGTTCAAAGACAAGGGACTTCCTGAACAAATCCTCAATTACTACAGGACGAACGAGGTGGATAAGTTCCAGTATTCAAGACCATTCAGGAAAGGAGAAAAAGATCCTGACAATGAGTTTGCCACTATGTGGATCGAAAGGACCACCTTTATTACGGCATATCGCTTTCCAGGAATCCTCAAGTGGTTTGAGGTGAAATCCATGTCGGTGGAAGAGATCAGCCCTTTGGACAACGCTATAGAAACCATGGAGATGGCCAATGAGAAGCTGAGTAATCTGGTGCAGCAGCAGGCATGTGACCGCTCTCTTCCTGTGCACCCGCTCTCCATGATGCTCAATGGAATTGTGGACCCGGCTGTCATGGGTGGCTTTTCCAACTATGAGAAGGCGTTTTTCACAGAGGCCTACATGAAGAAGAACCCTGACCACCTGGAACGCATTGAAGTCTTAAAACACCTGATCGCATTGCAGGTCCCGTTGCTTGACGAGGGGATTCGGATCCACGGAGAGAAATCCACGGAGCAGCTCAAACCCCTTCACAACAGAATCGTCACCTGCTTCCAGGACCTGCGCGCGAAAGTGGAGAAACTCTATGGTGTCATTACTCTACCCTGCTCTCTGACAGAAAAGAAAAAGAGTCGCGTGGGGTCGATGGTGATGCCGTACATCATGTCCTCCACGCTCAGACGGATGTCCACCATCTCAAACGCCTCCTCCGGACACTCCAGCGGCTCGGGCTCCTCCGACGGAAACTCCTCCAGACCTCAATCCCAGGATTCGCTGCTCTCCCGTGTGAGCGACAGCAGGGTTTCGGTTCTCTCCCGCTCAGAGGAAGATAATCGGATAAGTAAGAAGAACAGGAAGGAATGGAGCATGAGCAAGTCTCAGGTCTTACTGGAGCGACCTGGTGACAGAGATGAGATTCCTCCAGAGAAGCAGCCGAGGCCGAAAAGTCTGACGATAGGGGACCGGAGACTCACGCTGTCGCTGTTTCATGGAGAATCATCCAATTTGAGTTTACACAACCCACTCAGCCCTCTGCCTGCCACACCGCACACACCACGCAGCTCGAGTTACACGTGTCTCCCGAGCGAGAGTGACTTCAGCGCACCTGACATCACGAACACACCTCCACCAATGCCACCCAAAAAACACCCTCACGAGAGCGAGAGCATCTATAACTCTACTTCTGAGATCACGCCTCCTTTACCGACGAAAGCTGAAGTCAAGCCTCCACCGCCGCCACCCAAAACACGCAAGTCCATGCTTCCCAGTTATGAGAGCAATCCACAATAAACACACTCCGGTTCTCCCGTGGTACCCGCGTCTCAAATAAT

Function

symbol description
dock5 Predicted to enable guanyl-nucleotide exchange factor activity. Acts upstream of or within myoblast fusion. Predicted to be located in cytoplasm. Orthologous to human DOCK5 (dedicator of cytokinesis 5).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0007520 myoblast fusion biological_process

KEGG:

id description
K17707 DOCK5; dedicator of cytokinesis protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_10894958_10954990.mRNA True 5599 mRNA 0.48 49 10894917 10954990

Neighbor

gene id symbol gene type direction distance location
CI01000010_10522498_10524081 LRRTM4 coding downstream 370372 10521652 ~ 10524545 (-)
CI01000010_10399274_10399495 NA coding downstream 495422 10398897 ~ 10399495 (-)
CI01000010_10244595_10251464 PPP2R2AA, PPP2R2AB, PPP2R2A, PPP2R2C coding downstream 643453 10243609 ~ 10251464 (-)
CI01000010_10232696_10237520 BNIP3LA coding downstream 657397 10231943 ~ 10237520 (-)
CI01000010_10191288_10210585 DPYSL2A, DPYSL2B, DPYSL2 coding downstream 684332 10191260 ~ 10210585 (-)
CI01000010_10994885_10998605 NEFLB coding upstream 39801 10994791 ~ 10998677 (-)
CI01000010_11004549_11011803 NA coding upstream 47915 11002905 ~ 11011803 (-)
CI01000010_11018221_11023620 ASB6 coding upstream 62644 11017634 ~ 11023988 (-)
CI01000010_11024631_11032415 WDR13 coding upstream 69213 11024203 ~ 11032975 (-)
CI01000010_11079934_11081127 NA coding upstream 124904 11079894 ~ 11081127 (-)
G67628 NA non-coding downstream 80062 10752181 ~ 10814855 (-)
G67592 NA non-coding downstream 180057 10701056 ~ 10714860 (-)
G67571 NA non-coding downstream 241802 10652877 ~ 10653115 (-)
G67570 NA non-coding downstream 247850 10646839 ~ 10647067 (-)
G67569 NA non-coding downstream 248932 10645771 ~ 10645985 (-)
G67712 NA non-coding upstream 80952 11035942 ~ 11036180 (-)
G67724 NA non-coding upstream 137093 11092083 ~ 11092569 (-)
G67725 NA non-coding upstream 138351 11093341 ~ 11093588 (-)
G67734 NA non-coding upstream 156101 11111091 ~ 11111330 (-)
G67753 NA non-coding upstream 163994 11118984 ~ 11119458 (-)
G67099 NA other downstream 2220020 8641690 ~ 8674897 (-)
CI01000010_07880416_07900104 NA other downstream 2996799 7880375 ~ 7900104 (-)
G65453 NA other downstream 3222574 7659435 ~ 7672343 (-)
G64918 NA other downstream 4798437 6093689 ~ 6096480 (-)
G64877 NA other downstream 4977906 5916257 ~ 5917011 (-)
CI01000010_11929215_11933223 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other upstream 973971 11928448 ~ 11933343 (-)
CI01000010_11965317_11969111 NA other upstream 1009875 11964865 ~ 11969710 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_036189 dock5 coding NC_007119.7 CM002892.2 6651253 ~ 6825588 (-)
bowfin (Amia calva) AMCG00020783 dock5,LOC106585561 misc CM030127.1 CM030127.1 32707933 ~ 32744735 (+)