AMCG00020791


Basic Information

Item Value
gene id AMCG00020791
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 33163415 ~ 33179686 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020791
TGAAACAGTGTCTTCCGGCTGTAAAGCACACCTGCAACCAAGTAGAGTCTAGTGCGAGTCTAGTCTACACTTCTCCTGCTTCACTTGAACgcagtacatacacacataagcAGTTTAACTGTATTGTCATATCTGTCACTTATTACAGGCAGGCTGCTGTCATGTGGGATGCGGTGATAGTCGGAGCCGGTCTGGCTGGGTTAACCGCGGCAGGCGAGCTGCTCAAGAGAAACCCTGATCTGAAGGTCCTAGTGCTGGAAGGAAAAGATCGAGTGGGCGGACGGACAGTGACCCTCAGCCTGCCAGCAGCCCGGGGAGAGGATCGCTGGGACCTGGGGGGGCAGTGGGTGGGCAGGACTCAGACCCATGTGCTGGAGCTCATCCAGGAGCTGGGCCTGGAGACCTACTCACAATACACCAGCGGCAAGAAAGTGTACCAGTTAGGTGGACCTCAGGCCAGCATCCGCACCTACACCTCCAGTATCCCCCCGCTGTCCTGGCTGGCACTGGTTGACATGCAGTTGCTGCTGTGGAAGATTGAGAAGCTGAGTAAGACGGTTTCTGTGGACAACCCAGGCTCCGCCCCCAGGGCCGCAGAGTTTGACAGCATTACGCTATATTCCTATATCTCTGATCACACCTGGACACAAGAGGTGCGCGACGCCATGGAGGTGTCCTGCAGGTCTGTGTTTGGGGTGGAGAGCTCCCAGCTGTCCTTCCTCTACTTCCTGATGTACGGGGCGGCTGCGGGGGGCTTCTTGCCCCTCCTGGAAGCTACGGCGGGCTCTGCTCAGGAGCTCAAGGTGAAGGGGGGCACCCAGCAGCTGTCGGAGAGGCTGGCAGACCGAGTAGGAAGAGAGAACATCCGCCTGGCCTCCGCAGTGACTGCAGTAGAacagGGCTCTGACAGCGTGGAAGTGAGGACTGTCTCTGGCACTTTCACTTGCAAGGCTGTGATTGTGACCTGCCCACCTCATTTGGCGGCCAAGATCCACTACCAGCCCCCCCTGCCCCTGGAGAGGGAGCATCTCACTCAGTACATGCCAGTGGCTCACATGATGAAGTTCATCGTCACCTACCCCACGGCCTTCTGGCGTGAGAAGGGATACTCAGGCGAGGTTGTGACTCAGCCCAGCTCGGACTGCCCCTTCAGCGTGACCTTTGATGCTACAAGCCCCTCTGGGAACCCGGCGCTGGTGGGATTTGTCGCTGGTGTACAGGCTACTGACTGGAGCAACAGACCATTTGAGCAGAGGAGAGATGCTGTGGTCCAGAGTCTCTCCAGGTTCCTGGGTCCAGAGGCTTCCAACTACATCCACTATGCTGAGAAGGACTGGGCCAAAGAGAGCTTCAATGGCGGCTGCCCTGTGAACATCATGGTCCCGGGAACAATCACCTATTTTCATCCAAGCCTCAGGAAAGCTTGTGGAAGGATTTACTGGGCGGGCACTGAGACTGCCACCCAGTGGTGTGGGTACCTCAGTGGTGCCATCCAGTCGGGACAGAGGGTGGCGGTGGAGGTCTTGGGGAGCCTCTCTCCTGAATCTCTGACCCAGGAGGAGCAGGAGCGGCACAGGACATCGACAGAGTCACCCATCTCAAATCGAGATCGAGGAAGCGCAGCCGGAGCTTCCTGTCTCAACACCTGCTTCCTCCTCACTGCTATCTGTCTGGGACCTGCCTTCCTATTGGCCCAGCCCCGGCGCTGTCAAAACCTGATTGGTCAGGGACTTTCCGTTCTCCAGAAAGCTGTCGGGAAGCGATAGAATGATAGAATTCCCCCATTTTGTGATATAATGATATTACAAAcactataataattataatacatatattgtataaaatggCTTTCAATAAAAAGTCACAATGCacaaacagcaaacagaaactttaaatataacaatgcatTTCTCAGTTAAAcaccacaataaaaacatatattttgtaaacttGGGAGAATCAGGATTATTGTTAAACATATTATCTGggattgttttggaaatgcattggGATCTGTAGACAACCCTGACCCAGCGTGGGTATGAACTAATCAATTCAGCTTCCACATGCTATTTGTCCTGCAATCAGGCAGCTCATAATCGTCTCCATTAGTGTTGTGATTTTATATCTGAAAGTCAATCATCACCATCTGTGTAGTTGGGCGCCTGCCTTCTTCTTTCTCTGTACTTTTGGCTTTATTTTCTGCCCTGGGTGCTGAGTCAAtttgcaatacttttttttcctttagaaATATCAGAACGGACGGAGATTTAATCAAGTCATGCTCGGTCCAAGCCTTTAATGTGAACTAAGGCTCATTTTCTCATTAACTTTTAGTAgattaatttgtaataaatgcTACATTGCGGAAG

Function

GO: NA

KEGG:

id description
K00274 MAO, aofH; monoamine oxidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020791 True 2372 mRNA 0.52 12 33163415 33179686

Neighbor

gene id symbol gene type direction distance location
AMCG00020789 NA coding upstream 239652 32917620 ~ 32923763 (+)
AMCG00020786 ftsj1,LOC107589293,LOC107706451,LOC107708504,LOC107703563,LOC107591736 coding upstream 338513 32811293 ~ 32824902 (+)
AMCG00020782 NA coding upstream 392772 32767332 ~ 32770643 (+)
AMCG00020772 NA coding upstream 506931 32651732 ~ 32656484 (+)
AMCG00020771 NA coding upstream 554863 32605771 ~ 32608552 (+)
AMCG00020793 LOC108413329,LOC107552197,LOC107671041 coding downstream 476940 33656626 ~ 33660550 (+)
AMCG00020794 ppp2r2a,ppp2r2ab,LOC106585558 coding downstream 639375 33819061 ~ 33835453 (+)
AMCG00020795 LOC107720674,LOC107687791,LOC108427248,LOC107561399,LOC103036208,LOC100689723,LOC102791612,LOC101471601 coding downstream 662184 33841870 ~ 33844518 (+)
AMCG00020797 dpysl2b,LOC107678023,LOC107560521,LOC108427246 coding downstream 702052 33881738 ~ 33894537 (+)
AMCG00020801 NA coding downstream 788506 33968192 ~ 33990813 (+)
G65670 NA non-coding upstream 281297 32879099 ~ 32882118 (+)
G65594 NA non-coding upstream 477095 32629723 ~ 32686320 (+)
G65579 NA non-coding upstream 577701 32563430 ~ 32585714 (+)
G65534 NA non-coding upstream 718771 32443881 ~ 32444644 (+)
G65503 NA non-coding upstream 855696 32307438 ~ 32307719 (+)
G65829 NA non-coding downstream 870308 34049994 ~ 34051037 (+)
G65831 NA non-coding downstream 882466 34062152 ~ 34062595 (+)
G65873 NA non-coding downstream 1042660 34222346 ~ 34261929 (+)
G65877 NA non-coding downstream 1060203 34239889 ~ 34267100 (+)
G65891 NA non-coding downstream 1236909 34416595 ~ 34480123 (+)
G65705 NA other upstream 54989 33107873 ~ 33108426 (+)
G65691 NA other upstream 173970 32946731 ~ 32989445 (+)
AMCG00020783 dock5,LOC106585561 other upstream 418680 32707933 ~ 32744735 (+)
G65590 NA other upstream 568961 32592482 ~ 32594454 (+)
AMCG00020748 NA other upstream 882580 32274286 ~ 32280835 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other downstream 775120 33954806 ~ 33960582 (+)
G65830 tet3,LOC106906237 other downstream 879425 34059111 ~ 34059465 (+)
AMCG00020820 NA other downstream 1224848 34404534 ~ 34411620 (+)
G66008 NA other downstream 1604526 34784212 ~ 34787474 (+)
G66060 NA other downstream 1788158 34967844 ~ 35008322 (+)

Expression


Co-expression Network