G65994


Basic Information

Item Value
gene id G65994
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34746893 ~ 34748114 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82515
TTTTGAGCTTAatattaaactttttatttttatttttttattattaacacagcATCATTCTTCTATAAGATGAGATATTGGAAAGTCctcaatataaatcaaatataaatttTCCAAAAGCTATAGTGATCTAGTTCTTAATCCAGCTCCTTCGTCTCAGGCGTCGCACAGCACAGATGGGAGAAGAAGGTCACAGACATGATCGCACGTGGAGGGTGTTGTGTATGAGGCGCCATTAGGGAATTCACTCCGTGGTGCACACACTATATAGTGAGACGCGTACGATGAGATTTCTGCTCACACACTATCCTGAGATACTACCGCATACAGTGAGAATGGTCATCAGTGTCAGGTCCACACCCATTTGTTCACACATATGCCACTTTTAAGATATAGCATCAGGTGTAGCCAGGGCAgagatttatttctttaaaaatccatttGAATTATTGTCTGGGAAGATGTCCCACTAGAATTAGCTCTTTTGGAAGAGAACAGCTGTCTTCCGTGACAGATTTATGgaaaattacaataatgttGCGCTATATAAGAAATAACCAATAAccgtggggggggagggggggggagatgGGGTGTAGTCCAATACAGTagaaaatgtaatcatgttCCACTAGAACCGCCAAGATTTCAGACTAAATACAACTGCCACACCCGCAACATCTGCACCTCCTTCATAAAACacctttgaaatgcaaattaaaaacagttggTTAAAAATACGTTTACGGGCAGGTCTACACACTTAATACGGAAAAAGCTTAACATTgcttaatgtgctttaatatACCCATTCATTTTCAGGGtttgtacatttacagataGCCAATTCCTAATCCTATGAATAAAGGATGGGTAGGTGTTTAATGAATGtactttaaacattatttatattaaaactttaaaaattaaaagacagACACCTATCAGACCAGTACTTTCAAGAATAGCATTTCaagcaatattaaaaacataagtatCATCATGTTAAGCCCCATTAACATTAACCGCAATTGGTTATAATAAGTATAACAGTCGTATTTATGTAGATATCCAATATTTTGTATATGGGACCGGTGACTGTTGTATATTTTGGATGTACACTGatctgccataacattatgaccactgacaggtgacgtGAATAACACTGCTAATCTccttatcatggcacctgtcattgggtgggatatattaggcagca

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU82515 True 1222 lncRNA 0.37 1 34746893 34748114

Neighbor

gene id symbol gene type direction distance location
AMCG00020826 NA coding upstream 244691 34498286 ~ 34502202 (+)
AMCG00020827 NA coding upstream 253503 34481379 ~ 34493390 (+)
AMCG00020819 LOC107597267,LOC107654641,LOC107741205,LOC105890027,LOC107663217 coding upstream 271248 34462466 ~ 34475645 (+)
AMCG00020824 NA coding upstream 289992 34452211 ~ 34456901 (+)
AMCG00020825 NA coding upstream 295166 34450528 ~ 34451727 (+)
AMCG00020835 hk2,LOC106585103 coding downstream 102548 34850662 ~ 34865362 (+)
AMCG00020840 NA coding downstream 130576 34878690 ~ 34879805 (+)
AMCG00020842 NA coding downstream 133377 34881491 ~ 34892993 (+)
AMCG00020844 NA coding downstream 171704 34919818 ~ 34927630 (+)
AMCG00020843 camk2b1,LOC105905148,LOC102297714 coding downstream 186901 34935015 ~ 34936792 (+)
G65978 NA non-coding upstream 14514 34676911 ~ 34732379 (+)
G65962 NA non-coding upstream 219818 34526867 ~ 34527075 (+)
G65956 NA non-coding upstream 230997 34514046 ~ 34515896 (+)
G65954 NA non-coding upstream 234014 34512657 ~ 34512879 (+)
G65891 NA non-coding upstream 266770 34416595 ~ 34480123 (+)
G65996 NA non-coding downstream 1013 34749127 ~ 34749343 (+)
G65995 NA non-coding downstream 1384 34749498 ~ 34750151 (+)
G66072 NA non-coding downstream 276889 35025003 ~ 35026229 (+)
G66151 NA non-coding downstream 418954 35167068 ~ 35170275 (+)
G66231 NA non-coding downstream 685154 35433268 ~ 35433558 (+)
AMCG00020820 NA other upstream 335273 34404534 ~ 34411620 (+)
G65830 tet3,LOC106906237 other upstream 687428 34059111 ~ 34059465 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other upstream 786311 33954806 ~ 33960582 (+)
G65705 NA other upstream 1638467 33107873 ~ 33108426 (+)
G65691 NA other upstream 1757448 32946731 ~ 32989445 (+)
G66008 NA other downstream 36098 34784212 ~ 34787474 (+)
G66060 NA other downstream 219730 34967844 ~ 35008322 (+)
AMCG00020855 NA other downstream 399489 35147603 ~ 35149418 (+)
G66149 NA other downstream 415699 35163813 ~ 35164985 (+)
AMCG00020874 NA other downstream 999042 35747156 ~ 35750446 (+)

Expression


Co-expression Network