AMCG00020826


Basic Information

Item Value
gene id AMCG00020826
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34498286 ~ 34502202 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020826
ATGGACACTGCCAGGTTAAGAATCATCATCGTGGCCCTGTGGTTCCTTATCCACGCCGGGGGTTGCAGCCCAATCATGGCGCCTGAGAACCCCCGTCCTGAGATGGGAATGGATGGACGCAACCTCTTCAGCGACCCTCTGCTGGAGCAGGACAGCGAGCTGGATTTCCAGACCTTCATGCAGACCCTACGGAGCCAGTTCCTGAAGACCTTCAACCTGTCAGGCTTCCCTCAGCAGGGCGCCACCAAAGTGGAGCCGCCAGAGTACATGCTGGAGCTCTACAACAGGTTCGCCAACGATCGCTCCTCCATGCCCTCCGCCAACATTGTCCGCAGCTTCAAGAATGAAGACACATCCCCGTACAGCAAGGACAGCAGCGGCATTCGCAAGCACCCTCTGCTCTTCAACCTGTCCATCCCCCACCACGAGAGGATCACCAACGCCGAGCTGCGGCTGTACACCCTGGTGCAGCGCGACCGCCGCCTGTACGACGGAGTGGACAGGAAGGTGACCATCTATGAGGTGCGCGAGGGTGGGGAGGAACAGCAGGAGGCTCCGGAgcaggggaggagaggaggaggaggaggaggaggagggaaggaGGTGGTGCTAGCAGAGCTGGCGTCCCGGGAGGTGTACGGGACAGACAGCGGCTGGGAGGCCTTTGACCTGACCGAGGCCACCCGCCGCTGGCGCAAGTTGGACTACACCACGCACCGTCTGGAAGTGCACATCGAGAGCGTCGATGGCGGTGGTGGTGAGGGGGGCACAGAGGCCTACGAGGAGGGTAACCTGGACATCGATGTCAACCCCGAGGCCAAGCACGAACCCTTGCTCATTGTCTTCTCAGACGACCAGAGCAGTGACCacaaggaggagaggaaggagcTGAACGAGATGATCGGGCACGAGCAGATGCCGGAGCTGGAGAACCTGGAGACAAGCCTCAATGGGCTGGAGGGCCAGGACAGCGACGGCCCCAATGAGGAGTCCCTGATGCAGATGAGGTCCAATTTAATCTACGACACAGCATCCCGCATCCGGAGGAATGCCAAAGGCAACCACTGCAAGAAGACCTCCTTCTACGTGGAGTTCAAGGACATCGGCTGGGACAAGTGGATCCTCGCCCCTCCGGGCTACGAGGCCTACGAATGCAACGGTGTCTGCAGCTACCCCATGACCGAGCACGTCACACCCACTAAGCACGCAATCATTCAGACTTTGGTTCACACGACGAGTCCGCAGAAGGTGTCTAGAGCCTGCTGTGTGCCCACGAAACTAGACCCCATATCCCTGCTTTACCTGGATGACACAGGTGTTGTCACATACAAGTACAAATACGAGGGGATGGTGGTGGCGGAGTGCGGCTGCAGATAG

Function

GO:

id name namespace
GO:0060840 artery development biological_process

KEGG:

id description
K22670 BMP10; bone morphogenetic protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020826 True 1377 mRNA 0.60 2 34498286 34502202

Neighbor

gene id symbol gene type direction distance location
AMCG00020827 NA coding upstream 4896 34481379 ~ 34493390 (+)
AMCG00020819 LOC107597267,LOC107654641,LOC107741205,LOC105890027,LOC107663217 coding upstream 22641 34462466 ~ 34475645 (+)
AMCG00020824 NA coding upstream 41385 34452211 ~ 34456901 (+)
AMCG00020825 NA coding upstream 46559 34450528 ~ 34451727 (+)
AMCG00020823 NA coding upstream 48089 34445279 ~ 34450197 (+)
AMCG00020835 hk2,LOC106585103 coding downstream 348460 34850662 ~ 34865362 (+)
AMCG00020840 NA coding downstream 376488 34878690 ~ 34879805 (+)
AMCG00020842 NA coding downstream 379289 34881491 ~ 34892993 (+)
AMCG00020844 NA coding downstream 417616 34919818 ~ 34927630 (+)
AMCG00020843 camk2b1,LOC105905148,LOC102297714 coding downstream 432813 34935015 ~ 34936792 (+)
G65891 NA non-coding upstream 18163 34416595 ~ 34480123 (+)
G65877 NA non-coding upstream 231186 34239889 ~ 34267100 (+)
G65873 NA non-coding upstream 236357 34222346 ~ 34261929 (+)
G65831 NA non-coding upstream 435691 34062152 ~ 34062595 (+)
G65829 NA non-coding upstream 447249 34049994 ~ 34051037 (+)
G65954 NA non-coding downstream 10455 34512657 ~ 34512879 (+)
G65956 NA non-coding downstream 11844 34514046 ~ 34515896 (+)
G65962 NA non-coding downstream 24665 34526867 ~ 34527075 (+)
G65978 NA non-coding downstream 174709 34676911 ~ 34732379 (+)
G65994 NA non-coding downstream 244691 34746893 ~ 34748114 (+)
AMCG00020820 NA other upstream 86666 34404534 ~ 34411620 (+)
G65830 tet3,LOC106906237 other upstream 438821 34059111 ~ 34059465 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other upstream 537704 33954806 ~ 33960582 (+)
G65705 NA other upstream 1389860 33107873 ~ 33108426 (+)
G65691 NA other upstream 1508841 32946731 ~ 32989445 (+)
G66008 NA other downstream 282010 34784212 ~ 34787474 (+)
G66060 NA other downstream 465642 34967844 ~ 35008322 (+)
AMCG00020855 NA other downstream 645401 35147603 ~ 35149418 (+)
G66149 NA other downstream 661611 35163813 ~ 35164985 (+)
AMCG00020874 NA other downstream 1244954 35747156 ~ 35750446 (+)

Expression


Co-expression Network