G65962


Basic Information

Item Value
gene id G65962
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34526867 ~ 34527075 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU82472
CCagcgcttccatgtctggatgaaatagtGTTTtcctaattataaagaatacctcatgaattattgcttcccgtgtctcggaactgcaccgggacatatgccaagaaaatatcatccaggttcgggacggcaccgaacctcctttgaaatattgcttgtagatgtataaaaggccgtgtgaaactttcaataaacgaagataaacgaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82472 True 209 lncRNA 0.42 1 34526867 34527075

Neighbor

gene id symbol gene type direction distance location
AMCG00020826 NA coding upstream 24665 34498286 ~ 34502202 (+)
AMCG00020827 NA coding upstream 33477 34481379 ~ 34493390 (+)
AMCG00020819 LOC107597267,LOC107654641,LOC107741205,LOC105890027,LOC107663217 coding upstream 51222 34462466 ~ 34475645 (+)
AMCG00020824 NA coding upstream 69966 34452211 ~ 34456901 (+)
AMCG00020825 NA coding upstream 75140 34450528 ~ 34451727 (+)
AMCG00020835 hk2,LOC106585103 coding downstream 323587 34850662 ~ 34865362 (+)
AMCG00020840 NA coding downstream 351615 34878690 ~ 34879805 (+)
AMCG00020842 NA coding downstream 354416 34881491 ~ 34892993 (+)
AMCG00020844 NA coding downstream 392743 34919818 ~ 34927630 (+)
AMCG00020843 camk2b1,LOC105905148,LOC102297714 coding downstream 407940 34935015 ~ 34936792 (+)
G65956 NA non-coding upstream 10971 34514046 ~ 34515896 (+)
G65954 NA non-coding upstream 13988 34512657 ~ 34512879 (+)
G65891 NA non-coding upstream 46744 34416595 ~ 34480123 (+)
G65877 NA non-coding upstream 259767 34239889 ~ 34267100 (+)
G65873 NA non-coding upstream 264938 34222346 ~ 34261929 (+)
G65978 NA non-coding downstream 149836 34676911 ~ 34732379 (+)
G65994 NA non-coding downstream 219818 34746893 ~ 34748114 (+)
G65996 NA non-coding downstream 222052 34749127 ~ 34749343 (+)
G65995 NA non-coding downstream 222423 34749498 ~ 34750151 (+)
G66072 NA non-coding downstream 497928 35025003 ~ 35026229 (+)
AMCG00020820 NA other upstream 115247 34404534 ~ 34411620 (+)
G65830 tet3,LOC106906237 other upstream 467402 34059111 ~ 34059465 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other upstream 566285 33954806 ~ 33960582 (+)
G65705 NA other upstream 1418441 33107873 ~ 33108426 (+)
G65691 NA other upstream 1537422 32946731 ~ 32989445 (+)
G66008 NA other downstream 257137 34784212 ~ 34787474 (+)
G66060 NA other downstream 440769 34967844 ~ 35008322 (+)
AMCG00020855 NA other downstream 620528 35147603 ~ 35149418 (+)
G66149 NA other downstream 636738 35163813 ~ 35164985 (+)
AMCG00020874 NA other downstream 1220081 35747156 ~ 35750446 (+)

Expression


Co-expression Network