AMCG00021526


Basic Information

Item Value
gene id AMCG00021526
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20481211 ~ 20493174 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021526
ATGCGATGGAGTGTGGAGCCGGAGGCCTGGCGGTCGGTGCCCGTGGAGGGTGGGCGGCCCGGCACTCTGCCAGGCCCCGATGTGGTGCTAGTCATAGCCCCCACACACATCCATGGCACTAAAGGACAGCCTCTTCTTCTGCCAGTGGAGTACAACTTCGCCATCAAGGACGTGGACATCCAGGGCAGCTGGCATCTGAAGAATAAATCCAACGGTCTGACACACCTTGTGACGTTCAGAAACAAGACCGTCATCGCGGACATGCACATGGAATACACCAACAAGTTCTCCTTCCACCCCCCCAATGCGTCCCTGAAGATCAACAGGCTGGACGACACGGAAGAGGGGGAGTACGAGCTGACGATCAACATCAGGTTCTCAAACGACGCCCAACCGGTGAAGAAGACGAAaagcatcaaagtgacagttgaCGTGCCAGTGTCCAGACCGCTCATACGGTTGACTCCGGCCACTGCAGCGATCGAAGACAAAGACAACGTGACATTGAGCTGCTGGGTGCAAAATGGGACGAGGGTGCAGTACCGGTGGCTGAGAGAAACCAATCCCCTCCAGCCCGGCGCTCGCCACACGCTTTCAGATGGTCACAGCGTCCTGCGCATCAGTCCGGTGAGGAAGGCAGACATGGGGAACTACACCTGCGAGGCCAGCAATTACATCAGCCGCCAACAGAGCCAGAAACTCCCACTCAACGTCTTCTATGGACCCTACAACCTGGCCGTGAACTCGGACATTGGCCTGCAGACGGGCCAGGTCTTCACAGTGGATCCCGGGGAGCTGGTGTCATTTGACTGCTGGGCCGACTCCAACCCGCCCAACACCTACGTGTGGATTTCCAAAGGGATCAATTTCACAGAGGTGATCATGACGGGGCCTCGGTTTGAGGTGAAGTCGCTGACCCTCGCGCACCGGGAGGACTACACGTGCCGCGCGTACAACAACGTCACGCAGAAGCAAGACGAGGCCCAGTTCACCATCGTGGTCGCGGGCCTAGGAATCGGCAGGGAAAAACACTCCCAAGTTGGCAGTTCCATATCCCCGGTGGCGGCCATCACTGTGACTTCGCTCATCGTCATCACGTGCATGGTGTTTGTGCTCTTCAGAAAGGCTTGCCATCCTCAGAAAGGTCATGAAGATGCAACTGAAGATTTTGGCATCTACGAATTTATTGCCATTCCAGGGAAATCTGACCCCACGCAGGCTTCAAGCAGGTCTCTCTCGCGGCTGGATTCAGCCCAGGATTTACACACCACCATCTACGACGTCATCAGACACATTCCCGAAACACCTCCACAGGGACCTCTGAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021526 True 1329 mRNA 0.57 7 20481211 20493174

Neighbor

gene id symbol gene type direction distance location
AMCG00021522 NA coding upstream 87950 20389757 ~ 20393261 (+)
AMCG00021518 NA coding upstream 141473 20314180 ~ 20339738 (+)
AMCG00021513 NA coding upstream 206828 20214149 ~ 20274383 (+)
AMCG00021512 fzd1,LOC106605515,LOC105910048,LOC107565291 coding upstream 367116 20112413 ~ 20114095 (+)
AMCG00021511 cdk14 coding upstream 423426 20022522 ~ 20057785 (+)
AMCG00021527 vps50 coding downstream 12851 20506025 ~ 20524326 (+)
AMCG00021530 vps50 coding downstream 38994 20532168 ~ 20550930 (+)
AMCG00021529 NA coding downstream 61319 20554493 ~ 20563626 (+)
AMCG00021528 vps50 coding downstream 84519 20577693 ~ 20589296 (+)
AMCG00021532 LOC103394147,LOC106952338,LOC107383304,LOC107085850 coding downstream 209930 20703104 ~ 20721264 (+)
G86633 NA non-coding upstream 18220 20462255 ~ 20462991 (+)
G86625 NA non-coding upstream 71553 20408404 ~ 20409658 (+)
G86573 NA non-coding upstream 182429 20298462 ~ 20298782 (+)
G86536 NA non-coding upstream 275673 20205192 ~ 20205538 (+)
G86529 NA non-coding upstream 328445 20152245 ~ 20152766 (+)
G86665 NA non-coding downstream 7612 20500786 ~ 20501303 (+)
G86668 NA non-coding downstream 15334 20508508 ~ 20547410 (+)
G86685 NA non-coding downstream 119452 20612626 ~ 20614365 (+)
G86687 NA non-coding downstream 127332 20620506 ~ 20620721 (+)
G86695 LOC103362787 non-coding downstream 206040 20699214 ~ 20702457 (+)
G86601 NA other upstream 79962 20342610 ~ 20401249 (+)
G86616 NA other upstream 100787 20378423 ~ 20380424 (+)
AMCG00021517 gatad1 other upstream 109675 20368153 ~ 20371536 (+)
G86407 NA other upstream 979969 19499800 ~ 19501242 (+)
AMCG00021485 NA other upstream 1186432 19279765 ~ 19294779 (+)
G86688 NA other downstream 174296 20667470 ~ 20667927 (+)
AMCG00021539 pdk4,LOC107722149 other downstream 415643 20908817 ~ 20912002 (+)
AMCG00021550 NA other downstream 605245 21098419 ~ 21109368 (+)
AMCG00021551 NA other downstream 665450 21158624 ~ 21165500 (+)
AMCG00021561 LOC106582151,LOC105891776,LOC106605261 other downstream 736678 21229852 ~ 21232853 (+)

Expression


Co-expression Network