G86573


Basic Information

Item Value
gene id G86573
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 20298462 ~ 20298782 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU108061
gGGTACACCGTTGTTGAACTACATTTCTTTccctatgtgtctgtgtgagcaaggtcactgtctcactgtgctatagttcaaccctgatacctagaagaacagagtctgataagaaccagttttcaccagcaatttgggcttgatacatcgtccaaacccccttatattaaacattacattttccccggtttaaccatatattggtcttcctgagcagttgtcaggcagagaCCGAACCTgcactcatcacaggacagacatgtgggcctgttatctttctctcctggcTGGTCTGTATAAATGTGCCTGTTTGAAACTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108061 True 321 lncRNA 0.44 1 20298462 20298782

Neighbor

gene id symbol gene type direction distance location
AMCG00021513 NA coding upstream 24079 20214149 ~ 20274383 (+)
AMCG00021512 fzd1,LOC106605515,LOC105910048,LOC107565291 coding upstream 184367 20112413 ~ 20114095 (+)
AMCG00021511 cdk14 coding upstream 240677 20022522 ~ 20057785 (+)
AMCG00021507 NA coding upstream 316033 19975603 ~ 19982429 (+)
AMCG00021510 NA coding upstream 323358 19971973 ~ 19975104 (+)
AMCG00021518 NA coding downstream 15398 20314180 ~ 20339738 (+)
AMCG00021522 NA coding downstream 90975 20389757 ~ 20393261 (+)
AMCG00021526 NA coding downstream 182429 20481211 ~ 20493174 (+)
AMCG00021527 vps50 coding downstream 207243 20506025 ~ 20524326 (+)
AMCG00021530 vps50 coding downstream 233386 20532168 ~ 20550930 (+)
G86536 NA non-coding upstream 92924 20205192 ~ 20205538 (+)
G86529 NA non-coding upstream 145696 20152245 ~ 20152766 (+)
G86455 NA non-coding upstream 403843 19852369 ~ 19894619 (+)
G86454 NA non-coding upstream 460649 19829816 ~ 19837813 (+)
G86419 NA non-coding upstream 711093 19585989 ~ 19587369 (+)
G86625 NA non-coding downstream 109622 20408404 ~ 20409658 (+)
G86633 NA non-coding downstream 163473 20462255 ~ 20462991 (+)
G86665 NA non-coding downstream 202004 20500786 ~ 20501303 (+)
G86668 NA non-coding downstream 209726 20508508 ~ 20547410 (+)
G86685 NA non-coding downstream 313844 20612626 ~ 20614365 (+)
G86407 NA other upstream 797220 19499800 ~ 19501242 (+)
AMCG00021485 NA other upstream 1003683 19279765 ~ 19294779 (+)
AMCG00021472 NA other upstream 1243359 19047049 ~ 19055103 (+)
G86121 NA other upstream 2048776 18248490 ~ 18249686 (+)
AMCG00021441 NA other upstream 2825066 17470325 ~ 17473396 (+)
G86601 NA other downstream 43828 20342610 ~ 20401249 (+)
AMCG00021517 gatad1 other downstream 69371 20368153 ~ 20371536 (+)
G86616 NA other downstream 79641 20378423 ~ 20380424 (+)
G86688 NA other downstream 368688 20667470 ~ 20667927 (+)
AMCG00021539 pdk4,LOC107722149 other downstream 610035 20908817 ~ 20912002 (+)

Expression


Co-expression Network